Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2720 |
Symbol | |
ID | 6178812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3018635 |
End bp | 3019597 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641682497 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_001809413 |
Protein GI | 172061761 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000418106 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.234705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC ACAGCCTTGA TGGCCTGATG GTCTTTACTG GCAACGCGAA TCCCGCGCTC GCACAGGAAG TCGTCAATAT CCTTGGAATC CCCCTCGGCA AAGCAATGGT CAGCCGTTTC TCCGACGGCG AGATTCAAGT CGAGATCCAG GAAAACGTGC GCGGCAAGGA CGTCTTCGTC CTGCAATCCA CGTGCGCGCC GACGAACGAC AACCTGATGG AACTGATGAT CATGGTCGAC GCGCTCAAGC GTGCGTCCGC CGGCCGGATC ACCGCTGCCA TCCCCTACTT CGGCTATGCC CGCCAGGACC GTCGCCCGCG CTCGGCGCGC GTCGCGATCT CGGCGAAGGT CATCGCGAAC ATGCTGGAAA TCGCCGGCGT CGAGCGGATC ATCACGATGG ATCTGCACGC CGACCAGATT CAAGGCTTCT TCGACATCCC GGTCGACAAC ATCTACGCAA CGCCGATCCT GCTGGGCGAC CTGCGCAAGC AGAACTACGC GGATCTGCTC GTCGTGTCGC CGGACGTCGG CGGCGTGGTC CGCGCCCGGG CACTCGCGAA GCAGCTCAAC TGCGATCTCG CGATCATCGA CAAGCGTCGT CCGAAGGCGA ACGTCGCCGA AGTGATGAAC ATCATCGGTG AAGTCGAAGG CCGCACCTGC GTGATCATGG ACGACATGGT CGACACCGCC GGCACGCTCT GCAAGGCAGC GCAAGTCCTG AAGAATCGCG GTGCGAAGCA GGTGTTCGCG TACGCGACGC ACCCGGTTCT GTCAGGTGGC GCCGCCGAGC GTATCGCCGC ATCGGAACTC GACGAGCTGG TCGTCACCGA TACGATCCCG CTGTCGGCCG AATCGCTGGC CTGCTCGAAG ATCCGCTCGC TGACGAGCGC GAGCCTGCTG GCAGAAACGT TCTCGCGAAT CCGTCGCGGC GACTCGGTGA TGTCGCTGTT CGCGGAATCC TGA
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Protein sequence | MSSHSLDGLM VFTGNANPAL AQEVVNILGI PLGKAMVSRF SDGEIQVEIQ ENVRGKDVFV LQSTCAPTND NLMELMIMVD ALKRASAGRI TAAIPYFGYA RQDRRPRSAR VAISAKVIAN MLEIAGVERI ITMDLHADQI QGFFDIPVDN IYATPILLGD LRKQNYADLL VVSPDVGGVV RARALAKQLN CDLAIIDKRR PKANVAEVMN IIGEVEGRTC VIMDDMVDTA GTLCKAAQVL KNRGAKQVFA YATHPVLSGG AAERIAASEL DELVVTDTIP LSAESLACSK IRSLTSASLL AETFSRIRRG DSVMSLFAES
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