Gene BamMC406_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2720 
Symbol 
ID6178812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3018635 
End bp3019597 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID641682497 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001809413 
Protein GI172061761 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000418106 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.234705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC ACAGCCTTGA TGGCCTGATG GTCTTTACTG GCAACGCGAA TCCCGCGCTC 
GCACAGGAAG TCGTCAATAT CCTTGGAATC CCCCTCGGCA AAGCAATGGT CAGCCGTTTC
TCCGACGGCG AGATTCAAGT CGAGATCCAG GAAAACGTGC GCGGCAAGGA CGTCTTCGTC
CTGCAATCCA CGTGCGCGCC GACGAACGAC AACCTGATGG AACTGATGAT CATGGTCGAC
GCGCTCAAGC GTGCGTCCGC CGGCCGGATC ACCGCTGCCA TCCCCTACTT CGGCTATGCC
CGCCAGGACC GTCGCCCGCG CTCGGCGCGC GTCGCGATCT CGGCGAAGGT CATCGCGAAC
ATGCTGGAAA TCGCCGGCGT CGAGCGGATC ATCACGATGG ATCTGCACGC CGACCAGATT
CAAGGCTTCT TCGACATCCC GGTCGACAAC ATCTACGCAA CGCCGATCCT GCTGGGCGAC
CTGCGCAAGC AGAACTACGC GGATCTGCTC GTCGTGTCGC CGGACGTCGG CGGCGTGGTC
CGCGCCCGGG CACTCGCGAA GCAGCTCAAC TGCGATCTCG CGATCATCGA CAAGCGTCGT
CCGAAGGCGA ACGTCGCCGA AGTGATGAAC ATCATCGGTG AAGTCGAAGG CCGCACCTGC
GTGATCATGG ACGACATGGT CGACACCGCC GGCACGCTCT GCAAGGCAGC GCAAGTCCTG
AAGAATCGCG GTGCGAAGCA GGTGTTCGCG TACGCGACGC ACCCGGTTCT GTCAGGTGGC
GCCGCCGAGC GTATCGCCGC ATCGGAACTC GACGAGCTGG TCGTCACCGA TACGATCCCG
CTGTCGGCCG AATCGCTGGC CTGCTCGAAG ATCCGCTCGC TGACGAGCGC GAGCCTGCTG
GCAGAAACGT TCTCGCGAAT CCGTCGCGGC GACTCGGTGA TGTCGCTGTT CGCGGAATCC
TGA
 
Protein sequence
MSSHSLDGLM VFTGNANPAL AQEVVNILGI PLGKAMVSRF SDGEIQVEIQ ENVRGKDVFV 
LQSTCAPTND NLMELMIMVD ALKRASAGRI TAAIPYFGYA RQDRRPRSAR VAISAKVIAN
MLEIAGVERI ITMDLHADQI QGFFDIPVDN IYATPILLGD LRKQNYADLL VVSPDVGGVV
RARALAKQLN CDLAIIDKRR PKANVAEVMN IIGEVEGRTC VIMDDMVDTA GTLCKAAQVL
KNRGAKQVFA YATHPVLSGG AAERIAASEL DELVVTDTIP LSAESLACSK IRSLTSASLL
AETFSRIRRG DSVMSLFAES