| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2697 |
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| Symbol | |
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| ID | 6177171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2994074 |
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| End bp | 2996959 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682473 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001809390 |
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| Protein GI | 172061738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.44187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.109276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA TCCGTATCCG TGGGGCACGC ACCCACAACC TGAAAAACGT CAATCTCGAC
CTGCCGCGCC ACAAGCTGAT CGTGATTACC GGGTTGTCCG GGTCGGGCAA GTCGTCGCTC
GCGTTCGACA CCCTTTATGC AGAGGGCCAG CGCCGCTACG TCGAAAGCCT GTCCGCCTAC
GCCCGCCAGT TCCTGCAGTT GATGGAGAAA CCCGATGTCG ACCTGATCGA GGGGCTGTCG
CCCGCGATCT CGATCGAGCA GAAGGCGACG TCCCACAATC CGCGTTCGAC CGTCGGCACG
GTCACCGAGA TCCACGACTA CCTGCGACTT TTGTTCGCAC GTGTCGGCAC GCCCTACTGC
CCCGACCACG ACATCCCGCT CGAGGCGCAG AGCGTGTCGC AGATGGTCGA CGCGGCGCTC
GCGCTGCCCG AGGAAACCAA GCTGATGATC CTCGCGCCCG TCGTCGCGAA CCGCAAGGGC
GAGCACGCCG AGCTGTTCGA GGACATGCAG GCGCAGGGCT TCGTGCGCTT TCGCGTGCGC
TCCGGCGGCG GCACCGCGAA CGAAGGCGTC GCGAAGATCT ACGAGGTCGA GTCGCTGCCG
AAGCTCAAGA AGAACGACAA GCACACGATC GACGTCGTCG TCGACCGCCT GAAGGTGCGC
CCGGACATGA AGCAGCGCCT CGCGGAATCG TTCGAGACCG CGCTGCGCCT CGCCGACGGC
CGCGCGATCG CGCTCGAGAT GGATACCGAC CACGAGCACC TGTTCAGCTC GAAGTTCGCG
TGCCCGATCT GCTCGTACTC TTTGCAGGAG CTGGAGCCGC GCCTGTTCTC GTTCAACAAT
CCGATGGGCG CGTGCCCGGA ATGCGACGGC CTCGGCCAGA TCACGTTCTT CGACCCGAAG
CGGGTCGTCG CGCACCCGTC GCTGTCGCTC GCCGCGGGCG CCGTGAAGGG CTGGGACCGC
CGCAACCAGT TCTACTTCCA GATGCTGCAG AGCCTCGCGG CGTTCTACGA ATTCGACATC
GACGCCGCGT TCGAGGATCT GCCGGAAAAG ATCCGCAAGG TGCTGCTGTT CGGTTCGGGC
AAGCAAACGA TCCCGTTCTC GTACATCAAC GAGCGCGGCC GCACGACGAT CCGCGAGCAC
GTGTTCGAAG GGATCATCCC GAACCTCGAG CGCCGCTACC GCGAGACCGA TTCGGTCGCG
GTGCGCGAAG AACTCTCGAA GTACCAGAAC AACCAGCCGT GCCCGTCGTG CGAAGGCACG
CGGCTGCGCC GCGAGGCGCG CCACGTGCGG GTCGGCGCCG GCGACTACGC GCGCGGCATC
TATGAAATCA GCGGCTGGCC GCTGCGCGAC GCGCTCGGCT ATTTCGCCGG CCTGTCGCTC
GACGGCGCGA AACGCGAGAT CGCCGACAAG GTGATCCAGG AAATCGTCGC GCGCCTGACC
TTCCTGAACA ACGTCGGCCT CGACTACCTG TCGCTCGAGC GCAGCGCCGA GACGCTCTCC
GGCGGCGAGG CGCAACGGAT CCGGCTCGCG TCGCAGATCG GCTCGGGCCT GACCGGCGTG
ATGTACGTGC TCGACGAGCC GTCGATCGGC CTGCACCAGC GCGACAACGA CCGCCTGATC
GCGACGCTCA AGCACCTGCG CGACCTCGGC AACTCGGTGA TCGTCGTCGA GCACGACGAG
GACATGATCC GCACGGCCGA CTACGTCGTC GACATGGGCC CCGGCGCGGG CGAGCACGGC
GGCGTGGTGG TCGCCGAAGG CACGCCGAAG CAGGTGCAGT CGAACCCGCA GTCGCTCACA
GGCCAGTATC TGGTCGGCAA GCGCACGATC GAGTATCCGG ACGAGCGGTT CGCGCCCGAT
CCCGAGCGGA TGCTGCGCAT CGTCGACGCG CACGGCAACA ACCTGAAGCA CGTCGACCTC
GAGTTGCCGG TGGGCCTGCT GACCTGCATC ACCGGCGTGT CGGGCTCCGG CAAGTCGACG
CTGATCAACG ACACGCTGTA TCACGCGGTC GCGCGCCACC TGTACGGCTC GTCGGCCGAG
CCGGCGCCGC ACGAGGCCAT CGAGGGCCTC GAGCACTTCG ACAAGGTGAT CAACGTCGAC
CAGTCGCCGA TCGGCCGCAC GCCGCGCTCG AACCCGGCCA CCTACACGGG CCTGTTCACG
CCGATCCGCG AGCTGTTCTC GGGCGTGCCG ACCGCGAAGG AGCGCGGCTA CGATCCGGGC
CGCTTCTCGT TCAACGTGAA GGGCGGCCGC TGCGAGTCGT GCCAGGGCGA CGGCGTGCTG
AAGGTCGAGA TGCACTTCCT GCCGGACGTC TACGTGCCGT GCGACGTATG CCACGGCAAG
CGCTACAACC GCGAAACGCT CGACGTGCAT TACAAGGGCA AGAACATCAG CGAAGTGCTC
GACATGACGG TCGAGCAGGC GTACGAGTTC TTCAGCGCGG TGCCGGTGAT CGCCCGCAAG
CTGAAGACGC TGCTCGACGT CGGCCTCGGC TACATCCGCC TCGGCCAGTC GGCCACGACG
CTGTCGGGCG GCGAGGCGCA GCGCGTGAAG CTGTCGCTGG AGCTGTCGAA GCGCGACACG
GGCCGCACGC TGTACATCCT CGACGAGCCG ACCACCGGCC TGCACTTCCA CGACATCGCG
CTGCTGCTCG AGGTGATTCA CCGGTTGCGC GACCAGGGCA ACACGGTCGT GATCATCGAG
CACAATCTCG ACGTGATCAA GACGGCCGAC TGGGTGATCG ACCTCGGCCC CGAAGGCGGT
GCCGGCGGCG GCCAGATCAT CGCGCAGGGC ACTCCCGAGG AGATCGCGAA GACCAAGGCG
AGCTTCACCG GCAAGTACCT CGCGCCGCTG CTCAAGCGTT CGCCCCGCAA GGCGGCGGCC
GGCTGA
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| Protein sequence | MEQIRIRGAR THNLKNVNLD LPRHKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLQLMEK PDVDLIEGLS PAISIEQKAT SHNPRSTVGT VTEIHDYLRL LFARVGTPYC
PDHDIPLEAQ SVSQMVDAAL ALPEETKLMI LAPVVANRKG EHAELFEDMQ AQGFVRFRVR
SGGGTANEGV AKIYEVESLP KLKKNDKHTI DVVVDRLKVR PDMKQRLAES FETALRLADG
RAIALEMDTD HEHLFSSKFA CPICSYSLQE LEPRLFSFNN PMGACPECDG LGQITFFDPK
RVVAHPSLSL AAGAVKGWDR RNQFYFQMLQ SLAAFYEFDI DAAFEDLPEK IRKVLLFGSG
KQTIPFSYIN ERGRTTIREH VFEGIIPNLE RRYRETDSVA VREELSKYQN NQPCPSCEGT
RLRREARHVR VGAGDYARGI YEISGWPLRD ALGYFAGLSL DGAKREIADK VIQEIVARLT
FLNNVGLDYL SLERSAETLS GGEAQRIRLA SQIGSGLTGV MYVLDEPSIG LHQRDNDRLI
ATLKHLRDLG NSVIVVEHDE DMIRTADYVV DMGPGAGEHG GVVVAEGTPK QVQSNPQSLT
GQYLVGKRTI EYPDERFAPD PERMLRIVDA HGNNLKHVDL ELPVGLLTCI TGVSGSGKST
LINDTLYHAV ARHLYGSSAE PAPHEAIEGL EHFDKVINVD QSPIGRTPRS NPATYTGLFT
PIRELFSGVP TAKERGYDPG RFSFNVKGGR CESCQGDGVL KVEMHFLPDV YVPCDVCHGK
RYNRETLDVH YKGKNISEVL DMTVEQAYEF FSAVPVIARK LKTLLDVGLG YIRLGQSATT
LSGGEAQRVK LSLELSKRDT GRTLYILDEP TTGLHFHDIA LLLEVIHRLR DQGNTVVIIE
HNLDVIKTAD WVIDLGPEGG AGGGQIIAQG TPEEIAKTKA SFTGKYLAPL LKRSPRKAAA
G
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