| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2671 |
|---|
| Symbol | |
|---|
| ID | 6179040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2967189 |
|---|
| End bp | 2967914 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641682447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001809364 |
|---|
| Protein GI | 172061712 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1556] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC GCGACGCGAT CCTCGCGCGC CTGCGCGCCG CCGCGCCCGG CGTCGCCGCA
AACGCCGCAC CGGCGCTCGG CGCGCGCATC GACACGCATT ACGCCGCGCG GCGCGCGCCC
GCCGCACCCG ACCCGCTCGC GCTCGCGCGG ACGATGCAGG CCGCGCTCGC CGCGTCGCAT
GCCGACGTCT GGTGCGCCAG CGCCGACGCG TGGCCCGCAC AGCTTGCCGC GCGTCTGGCC
GACGCCGGCG TGCGCCGCCT GCTGCTGGAC CCGGCGCGCG CCGAATCCGC GGCGCTCGCG
CGGGTGCTGC CCGACGCGGT CGCGCCGGTG CCGTTCGACC GGCCGATCGA CGCGTGGAAA
GCCGAGCTGT TCGACACGAT CGACGCGGGC TTCACCGTCG CGCGCTCGGG CATCGCGACG
ACCGGCACCG TCGTGCTCGC GCCCGATGCC GGCACGCCGC GCACGGTGTC GCTGGTGCCG
CCGCTGCACA TCGCACTCGT CCACGCGAAC ACGCTGCATG CCGACCTCCA CGCGGCCGTG
CACGCGGAGC GCTGGCACGC CGGCATGCCG ACCAACGTCG TGCTGGTGTC GGGCCCGTCG
AAGACGTCCG ATATCCAGCA GACCCTCGCG TACGGCGCAC ACGGCCCGCG CCACCTCTGG
GTCGTGATCG TCACCGGGCC GGCCGCCGAA CCGGCCGCCA CCGCCTGCCA GGAGCTGCCG
CGATGA
|
|---|
| Protein sequence | MSARDAILAR LRAAAPGVAA NAAPALGARI DTHYAARRAP AAPDPLALAR TMQAALAASH
ADVWCASADA WPAQLAARLA DAGVRRLLLD PARAESAALA RVLPDAVAPV PFDRPIDAWK
AELFDTIDAG FTVARSGIAT TGTVVLAPDA GTPRTVSLVP PLHIALVHAN TLHADLHAAV
HAERWHAGMP TNVVLVSGPS KTSDIQQTLA YGAHGPRHLW VVIVTGPAAE PAATACQELP
R
|
|---|
| |