Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2654 |
Symbol | |
ID | 6177016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2948996 |
End bp | 2950519 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641682430 |
Product | threonine dehydratase |
Protein accession | YP_001809347 |
Protein GI | 172061695 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCC ACGATTACCT GAAGAAAATC CTCACCGCGC GCGTCTACGA CGTCGCGCTC GAGACGGAAC TCGAACCCGC CCGCAACCTG TCGGCCCGAC TGCGCAACCC CGTTTACCTG AAGCGCGAGG ACAACCAGCC GGTGTTCTCG TTCAAGCTGC GCGGCGCGTA CAACAAGATG GCGCACATTC CGGCCGACGC GCTCGCGCGC GGCGTGATCA CGGCATCGGC CGGCAATCAT GCGCAGGGCG TCGCGTTCTC CGCGGCCCGG ATGGGCATCA AGGCCGTGAT CGTCGTGCCC GTCACGACGC CGCAGGTGAA GGTCGACGCG GTGCGTGCGC ACGGCGGCCC GAGCGTCGAG GTGATCCAGG CGGGCGAGTC GTACAGCGAT GCGTATGCGC ATGCCGTGAA GGTACAGGCC GAACGCGACC TCACGTTCGT CCACCCGTTC GACGATCCGT ACGTGATCGC CGGCCAGGGC ACGATCGCGA TGGAAATCCT GCGGCAGCAC CAGGGCCCGA TTCACGCGAT CTTCGTGCCG ATCGGCGGCG GCGGCCTCGC GGCCGGCGTG GCCGCGTACG TGAAGGCGGT GCGGCCGGAG ATCAAGGTGT TCGGCGTGCA GGCCGAGGAT TCATGTGCGA TGGCGCAGTC GCTGCAGAAG GGCGAGCGCG TCGAGCTGAG CGAAGTCGGC CTGTTCGCGG ACGGCACCGC GGTGAAGCTC GTCGGCGAGG AAACCTTCCG GCTCTGCAGC GAATTCCTCG ACGGCGTCGT GACGGTCGAC ACCGACGCGC TGTGCGCGGC GATCAAGGAC GTGTTCCAGG ACACGCGCAG CGTGCTCGAG CCGTCCGGCG CGCTCGCGGT CGCAGGTGCG AAACGCTACG CGGAACGCGA AGGGATCGAG AACCAGACGC TCGTCGCGGT CACGTCCGGC GCGAACATGA ACTTCGACCG GATGCGTTTC GTTGCCGAAC GCGCGGAAGT CGGCGAGGCG CGCGAAGCCG TGTTCGCGGT CACGATCCCC GAGGAGCGCG GCAGCTTCAA GCGCTTCTGC TCGCTCGTCG GCGAGCGCAA CGTCACCGAG TTCAACTATC GGATCGCCGA TGCGCAGGCC GCGCATATCT TCGTCGGCGT GCAGATCAAG CGGCGCGGCG AATCGGCGGA GATCGCCGCG AACTTCGAGT CGCACGGCTT CAAGACCGTC GACCTGACGC ACGACGAGCT GTCGAAGGAA CACATCCGCT ACATGGTGGG CGGCCGCTCG CCGCTCGCGC TCGACGAACG CCTGTTCCGC TTCGAATTCC CGGAACGGCC GGGCGCGCTG ATGAAGTTCC TGTCGTCGAT GGCGCCGGAC TGGAACATCA GCCTGTTCCA TTACCGCAAC CAGGGTGCAG ACTACAGCTC GATCCTCGTC GGGCTGCAGG TGCCGCAGGC CGATCGCGCC GAGTTCGAAC GCTTCCTCGC GGCGCTCGGC TATCCGTATG TCGAAGAGAG CGCCAATCCG GCGTATCGGC TCTTCCTGTC GTAA
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Protein sequence | MASHDYLKKI LTARVYDVAL ETELEPARNL SARLRNPVYL KREDNQPVFS FKLRGAYNKM AHIPADALAR GVITASAGNH AQGVAFSAAR MGIKAVIVVP VTTPQVKVDA VRAHGGPSVE VIQAGESYSD AYAHAVKVQA ERDLTFVHPF DDPYVIAGQG TIAMEILRQH QGPIHAIFVP IGGGGLAAGV AAYVKAVRPE IKVFGVQAED SCAMAQSLQK GERVELSEVG LFADGTAVKL VGEETFRLCS EFLDGVVTVD TDALCAAIKD VFQDTRSVLE PSGALAVAGA KRYAEREGIE NQTLVAVTSG ANMNFDRMRF VAERAEVGEA REAVFAVTIP EERGSFKRFC SLVGERNVTE FNYRIADAQA AHIFVGVQIK RRGESAEIAA NFESHGFKTV DLTHDELSKE HIRYMVGGRS PLALDERLFR FEFPERPGAL MKFLSSMAPD WNISLFHYRN QGADYSSILV GLQVPQADRA EFERFLAALG YPYVEESANP AYRLFLS
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