Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2629 |
Symbol | |
ID | 6176004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2917872 |
End bp | 2920232 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682405 |
Product | organic solvent tolerance protein |
Protein accession | YP_001809322 |
Protein GI | 172061670 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.355062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCA AACCGCTATT CCCGAATGTT TTCCCCGGTG ACGGGGCGCC GCGCAAACGG CGGCTCGCGC TCGCGCTCCT GGCCGTGCCG GGCCTCGTGC CGGCCGTGTC GTACGCGCAG CTGTCGGGCG CGGCCGCGCA GCCGCAGCCG CTCGACTCGC CGTGGGATCT GCGTCTCGCC CCGCAGCTCG AGGATCATCC GCTGAAGGAC GGCGCGAAGC CGGCCGCCTT CGTGATTGCC GACCATACGA GCGGCACGGC CGAACAGGAC CTCGCCGCGA AGGGCTCGGC CGAGCTGCGC CGCGGCGATG CCGTCGTGAA GGCCGACGCG CTCCACTACG ATCAGGATAC CGACATGGCC GATGCGTACG GCCAGGTCCG GGTGATCAAC GGCGGCACGT CGTTCGCGGG CCCCGAAGCG CATCTGAAGG TCGAGGCGAA CCAGGGCTTC ATGACGGCGC CGAAGTACCA CTTCAACGTG ACGGGCGGGT CCGGCAGCGC GGAGCGCGTC GACTTGCTCG ACAGCGAGCG CTCGGTGTTC GTCAACGGCA CCTACACCGC GTGCCAGTGC GCGACGGACC CGGCGTGGTA CATCAAGGGC AGCCGCTTCG ACTTCGATAC GGGCGCCGAC GAAGGCACCG CGCGCAACGG CGTGCTGTTC TTCCAGGGCG TGCCGATCTT CGCGAGCCCG TGGTTGACGT TCCCGTTGTC GGGCGAGCGG CGCAGCGGCC TGCTGCCGCC GACGTTCTCG ATGAACTCGA ACAACGGGTT CGAGCTGACG CTGCCGTACT ACTTCAACAT CGCGCCGAAC CGCGACCTGA CGATCACGCC GCGCATCATC TCGCGGCGCG GCGTGCAGAC CGAAGCGACG TTCCGCTACC TGTCGCCGAC CTATTCCGGC ACGCTGACGG CCAATTACCT GCCGGATGAC CGGCTCGCGC ACCGCAACCG CTACGCGATC TACTGGCAGC ACCAGCAGAA CTTCGGCGGC GGCTTCGGCG GCTACGTCTA CTTCAACAAG GTCTCGGACA ACACGTATCC GGAAGACCTC GGGTCGACGA ACGAGTTCAT CAACGGCACG CAGACGCTGT ACCAGCAGGA AGCCGGGCTC ACGTACAACA ACGGCCCGTG GTCGGTGCTC GCGCGCTACC AGCACTGGCA GACGCTGCCG CCGTCGATCG CGCCTTACAG TCGCGAGCCG CAGTTGAACG TGAAGTACAC GAAGTACAAC GTCGGCGGCT TCGACTTCGG CGCGGAAGCC GACTATTCGC GGTTCCGCAT CACAACCGCC GATGCGACCG AAGGCGACCG GATCGTCTTC AACCCGTACA TCGCGTACGG CGTGTACGGC CCCGGCTACT TCGTCGTGCC GAAGGTCCAG TACCACTTCG CGTCGTACGA CCTGAACTAC CTGTCGTCGA GCACGCCGAA CAGCCCGAAG CGCTTCACCG AGTCGATCCC GACCGTGAGC TTCGACACGG GCCTGATCTT CGACCGCTCG GTGCGCCTGT TCGGCCAGGA CTTCATCCAG ACCCTCGAGC CGCGCCTGTA CTACGTGTAC ACGCCGTATC GCGACCAGTC GAACGCGCCG CTGTTCGACA CCGCGGAATC CGACTTCGGC CTCGCGGAGA TCTACCAGCC GAACACGTTC GTCGGCAACG ACCGGATCGC GGACGCGAAC CGGATCACGG CCGGCCTGAC GTCGCGCTTC ATCGATCCGC GCACCGGCGA CGAACGCGCG CGCTTCGTGA TCGCGCAGCA GTACTACTTC GCCGATCAGC GCGTCACGCT GAACTCGGTG CAGGCGCCCG TGCAGGCGCG CCACTCGGAC CTGATCGTCG GTGCCGCGCT CAAGCTCGGC TCCGGCTTCA TGTCGGAAAC CGCGTTCCAG TACAACCAGA ACAACAACCA GCTCGTGAAG TCGAGCATCG GTTTCGGCTT CAGCCCGGGC GAGCGTCGCG TGATCAACGT CGGCTATCGC TATACGCGCG CGAACACGAC GCTCGACAAC CAGCCGATCA ACCAGTTCCT GGTGTCCGCG CAATGGCCGC TCACGCGCCG CCTGTACGCG GTCGGCCGCT TCAACTACGA CCTGGCCGCC GACCGGATCG TCGACGGCCT GCTCGGCTTA CAATACGACG CGGATTGCTG GGCGCTCGGC GTCGGTGTCC AGCGCTTCGC GAACGGCGTG AACTCGTCGG GGCAGCAGAA CTCGTCGACG CGATTCATGA TGCAGCTGAC GTTGAAGGGG CTGTCGAGCA TCGACAACGG TCTGGTGGCG GCATTCCGCG CCGGGGTGCC GGGCTATACG CCGCTGCCGT CCGCGCCGCC GCCGATGTCC CGCTTCAGTA ACTACGAGTA A
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Protein sequence | MPPKPLFPNV FPGDGAPRKR RLALALLAVP GLVPAVSYAQ LSGAAAQPQP LDSPWDLRLA PQLEDHPLKD GAKPAAFVIA DHTSGTAEQD LAAKGSAELR RGDAVVKADA LHYDQDTDMA DAYGQVRVIN GGTSFAGPEA HLKVEANQGF MTAPKYHFNV TGGSGSAERV DLLDSERSVF VNGTYTACQC ATDPAWYIKG SRFDFDTGAD EGTARNGVLF FQGVPIFASP WLTFPLSGER RSGLLPPTFS MNSNNGFELT LPYYFNIAPN RDLTITPRII SRRGVQTEAT FRYLSPTYSG TLTANYLPDD RLAHRNRYAI YWQHQQNFGG GFGGYVYFNK VSDNTYPEDL GSTNEFINGT QTLYQQEAGL TYNNGPWSVL ARYQHWQTLP PSIAPYSREP QLNVKYTKYN VGGFDFGAEA DYSRFRITTA DATEGDRIVF NPYIAYGVYG PGYFVVPKVQ YHFASYDLNY LSSSTPNSPK RFTESIPTVS FDTGLIFDRS VRLFGQDFIQ TLEPRLYYVY TPYRDQSNAP LFDTAESDFG LAEIYQPNTF VGNDRIADAN RITAGLTSRF IDPRTGDERA RFVIAQQYYF ADQRVTLNSV QAPVQARHSD LIVGAALKLG SGFMSETAFQ YNQNNNQLVK SSIGFGFSPG ERRVINVGYR YTRANTTLDN QPINQFLVSA QWPLTRRLYA VGRFNYDLAA DRIVDGLLGL QYDADCWALG VGVQRFANGV NSSGQQNSST RFMMQLTLKG LSSIDNGLVA AFRAGVPGYT PLPSAPPPMS RFSNYE
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