Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2622 |
Symbol | |
ID | 6176036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2912119 |
End bp | 2912976 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682398 |
Product | hypothetical protein |
Protein accession | YP_001809315 |
Protein GI | 172061663 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.276697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC CGCTCTTCGA CGGGCCGGCC GCGGCCTCGC CGGCACCGTC GGTGCCCGCC GCGCCGCCCA CGTCACCTGA AGCGGCCACG GCTCCCGCGG TGCCCACCGC GCCGCTCGAT CCGGGCCCCG CGCGCGATCG CTCCCGCGTC CGTACGTTCG CACTCGACAG CCGCGTCCTC GAATACCGGC TCAAGCGCTC CGCGCGCCGC ACGATCGGCT TCACGATCGA CGGCAGCGGG CTGTCGATCA CCGCGCCGCG CTGGGTCACG CTCGCCGACA TCGAAGCGGC GATCGCCGAG AAGCAGCGCT GGATCTTCGC GAAGCTCGCG GAGTGGAAGA CCCGCACCGA GCAGCGCGCG CTGCCGCAAA TCGACTGGCG CGACGGCGCG CAACTCCCGT ATCTCGGCAA GACGATCACG ATCGCGCTCG GCGCGGGCGC CGTCGCGTTC GACGCCGACG CGCTGCGCCT GTCGCTGCCG CTGCCCGTGC AGGCGGACAT GCAGCAGATC AAGGATCGCG TGCAGGGCTG GCTGCAGGGC GAAGCGAAGC GGATCTTCGG CGAACGGCTG GTGATCTACG CGGAAAGGCT CGGCGTCACG TATTCGATGT ACGCGCTATC GTCGGCCGCG ACGCGCTGGG GCAGTTGCTC GAGCGACGGC AAGATCCGGC TGAACTGGCG GCTGATCCAT TTCCCGATGT CGATCGTCGA CTACGTCGTC GCGCACGAGC TGTCGCACCT GCGCGAAATG AACCACAGCC CGGCCTTCTG GCAGACCGTC GAATCGATCT TCCCGGAATT CCGCGAAGCA CGGCACACGC TCAAGCATCA CCCGCCCGAA CTGCTGCCGG CGCTGTAG
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Protein sequence | MDLPLFDGPA AASPAPSVPA APPTSPEAAT APAVPTAPLD PGPARDRSRV RTFALDSRVL EYRLKRSARR TIGFTIDGSG LSITAPRWVT LADIEAAIAE KQRWIFAKLA EWKTRTEQRA LPQIDWRDGA QLPYLGKTIT IALGAGAVAF DADALRLSLP LPVQADMQQI KDRVQGWLQG EAKRIFGERL VIYAERLGVT YSMYALSSAA TRWGSCSSDG KIRLNWRLIH FPMSIVDYVV AHELSHLREM NHSPAFWQTV ESIFPEFREA RHTLKHHPPE LLPAL
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