| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2608 |
|---|
| Symbol | |
|---|
| ID | 6175964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2895834 |
|---|
| End bp | 2897009 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682384 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001809301 |
|---|
| Protein GI | 172061649 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC CGTTACTGGC GCTCGCGATC AGCGCGTTCG CCATCGGCAC CACCGAATTC
ATCATCATGG GGCTCCTGCC CGAAGTCGCG CACGACCTGG CGGTGTCGCT GCCGTCGGCC
GGCCTGCTCG TCACCGGCTA CGCGCTCGGC GTCGCGGTCG GCGCGCCGCT GCTTGCGCTG
CTGACGAGCC GCATGCCGCG CAAGGCCGCA TTGCTGCTGC TGATGGCGAT CTTCATCATC
GGCAACGTGC TGTGCGCGAC CGCATCCGGC TACGCGATGC TGATGGTCGC GCGCGTCGTC
ACGTCGTTCG CGCACGGCTC GTTCTTCGGG ATCGGCGCGG TGGTCGCCGC GTCGCTCGTG
CCGGCCGACA AGCGCGCGAG CGCGATCGCG CTGATGTTCA CGGGCCTCAC GCTGTCGAAC
GTGCTCGGCG TGCCGTTCGG CACGTTCGTC GGCCAGCTGC TCGGCTGGCG CGCGTCGTTC
TGGATCGTCG CCGCGCTCGG CGTGCTGTCG CTCGGCGGCG TCGCGCTGCT GGTGCCGAAC
CGTCATGACG GCGGGCCCGT CGGCCTCGGC CACGAAGTGC GCGTGCTGAA GGAGCCGCAG
GTCTGGCTCG CGCTGCTGAT GACCGTGCTC GGCTTCGGCG GCGTGTTCGT CGTGTTCACG
TACATCGCGC CGATCCTCGA AACCGTCACC GGCTATTCGC CGCGGGCGGT CGCGCTGATC
CTCGTGCTGT TCGGCGCCGG GCTGACGGTC GGCAACACGC TCGGCGGCAA GCTTGCCGAC
CGCGCGCTGA TGCCGTCGCT GATCGCGATC CTGGTCGCGC TGATGGCGGT GATGGCCGTG
TTCGCGAAGA CGAGCCACCT GCCGGTCGCG GCCGCGGCGA CGGTGTTCGT GTGGGGGATC
GCCGCGTTCG CGACGGTGCC GCCGCTGCAG GCGCGCGTCG TCGAGAAGGC CGCTAGCGCG
CCGCATCTGG CGTCGACGCT GAACATCGGC GCCTTCAACG TCGGCAATGC GGGCGGTGCG
TGGCTCGGCG GACTGGCGCT GGAGCACGGC TTCGCGCTCG ATGCGCTGCC GTGGGTCGCC
GTCGCGGTGA CGTTCGCGGC GCTCGTCGTC ACGTGGTTCG CGATGCGGCT CGATGCGCGC
GCGCCGGCGC GCGGCACGGC CCCGGCCGCG CATTGA
|
|---|
| Protein sequence | MPIPLLALAI SAFAIGTTEF IIMGLLPEVA HDLAVSLPSA GLLVTGYALG VAVGAPLLAL
LTSRMPRKAA LLLLMAIFII GNVLCATASG YAMLMVARVV TSFAHGSFFG IGAVVAASLV
PADKRASAIA LMFTGLTLSN VLGVPFGTFV GQLLGWRASF WIVAALGVLS LGGVALLVPN
RHDGGPVGLG HEVRVLKEPQ VWLALLMTVL GFGGVFVVFT YIAPILETVT GYSPRAVALI
LVLFGAGLTV GNTLGGKLAD RALMPSLIAI LVALMAVMAV FAKTSHLPVA AAATVFVWGI
AAFATVPPLQ ARVVEKAASA PHLASTLNIG AFNVGNAGGA WLGGLALEHG FALDALPWVA
VAVTFAALVV TWFAMRLDAR APARGTAPAA H
|
|---|
| |