| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2595 |
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| Symbol | |
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| ID | 6176257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2881941 |
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| End bp | 2883380 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682371 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001809288 |
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| Protein GI | 172061636 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.381467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCG AATCTCTCGG CTTGGCCGAA CCGCTGGTCA AGGCGGTCAA TGAGCTCGGC
TACACATCGC CGACCCCCAT CCAGCAGCAG GCCATCCCCG CCGTCCTCGG CGGCGGCGAC
CTGCTCGCCG GCGCACAGAC CGGCACCGGC AAGACCGCCG GCTTCACGCT GCCGATCCTG
CAGCGCCTGC ACACGTACTA CGCCGAGCAT CGCGGTGCGA AGCGCGCGGT GCGTGCGCTG
ATCCTCACGC CGACGCGCGA ACTCGCCGCC CAGGTCGAGG AAAGCGTGCG CGCGTACAGC
AAGTACGTGA AGCTGCGCTC GACCGTGATG TTCGGCGGCG TCAGCATCAA TCCGCAGATC
GACGCGCTCA AGCGCGGCGT CGACATCGTC GTCGCGACGC CGGGGCGTCT GCTCGACCAC
ATGCAGCAGA AGACGATCGA TCTGTCGAAC CTCGACATCC TCGTGCTCGA CGAAGCCGAC
CGGATGCTCG ACATGGGCTT CATCCACGAC ATCAAGCGCG TGCTGGCGAA GCTGCCGCCG
CAGCGCCAGA ACCTGCTGTT CTCGGCCACC TTCTCCGACG AGATCAAGTC GCTCGCCGAC
AGCCTGCTCG ATTCGCCGGC GCTGATCGAA GTCGCGCGCC GCAACACCAC CGCGGAAAGC
GTCGCGCAGA AGATCCACCC GGTCGATCGC GATCGCAAGC GCGAGCTGCT CACGCACCTG
ATCCGCGAAC ACAACTGGTT CCAGGTGCTC GTGTTCACGC GCACCAAGCA CGGCGCGAAC
CGGCTCGCCG AACAGCTGAC GAAGGACGGC ATCAGCGCGA TGGCGATCCA CGGCAACAAG
AGTCAGTCGG CCCGCACGCG CGCGCTCGCG GAGTTCAAGA GCAGCACGCT GCAGGTGCTG
GTCGCGACCG ACATCGCCGC ACGCGGCATC GACATCGATC AGCTGCCGCA CGTCGTCAAC
TTCGACCTGC CGAACGTGCC GGAAGATTAC GTGCACCGGA TCGGCCGCAC GGGCCGTGCA
GGCGCGACCG GTGAAGCCGT GTCGCTCGTG TGCGTCGACG AGAAGCAGCT GCTGCGCGAC
ATCGAGCGGC TGATCAAGCG CGAGATTCCG CAGGAAGTGA TCGCGGGCTT CGAACCCGAT
CCGAGCGCGA AGCCGGAACC GATCCAGCAG CGCCGCGGGC AGCAGCCGCG TGGCGGCAAT
GCCGGCGGCG GCGGCAATCG CCAGCCGCGT GCAGGCGGCT CAGGCCAGCC GGCCGCGAAG
CGCGAAGGAA ATGCGCAGCC GAAGGCCGCG AAGGCAGCCA AGCCGCGCAC GGCCGGCGGC
GCGGGCGGCA ATGCCGGCGG CGGCCGTCCG TCCGGCGGCA CCGGTGCACG CCCGGCGAGC
GGCAACGCCG CGCATCCGAA CCGCAACCGT CCGTCGCGCA GCGGCCAGCG CGGTCACTGA
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| Protein sequence | MSFESLGLAE PLVKAVNELG YTSPTPIQQQ AIPAVLGGGD LLAGAQTGTG KTAGFTLPIL
QRLHTYYAEH RGAKRAVRAL ILTPTRELAA QVEESVRAYS KYVKLRSTVM FGGVSINPQI
DALKRGVDIV VATPGRLLDH MQQKTIDLSN LDILVLDEAD RMLDMGFIHD IKRVLAKLPP
QRQNLLFSAT FSDEIKSLAD SLLDSPALIE VARRNTTAES VAQKIHPVDR DRKRELLTHL
IREHNWFQVL VFTRTKHGAN RLAEQLTKDG ISAMAIHGNK SQSARTRALA EFKSSTLQVL
VATDIAARGI DIDQLPHVVN FDLPNVPEDY VHRIGRTGRA GATGEAVSLV CVDEKQLLRD
IERLIKREIP QEVIAGFEPD PSAKPEPIQQ RRGQQPRGGN AGGGGNRQPR AGGSGQPAAK
REGNAQPKAA KAAKPRTAGG AGGNAGGGRP SGGTGARPAS GNAAHPNRNR PSRSGQRGH
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