| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2590 |
|---|
| Symbol | |
|---|
| ID | 6176308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2876285 |
|---|
| End bp | 2876989 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682366 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001809283 |
|---|
| Protein GI | 172061631 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGCG AACGGAGAAC GATCATTCAA CGCGACCTGC ATGGACAGAC GTCCTTCCGC
CTTGCGACGG CGATCCTGCG TGGCGACTAT CCGCCCGAAT CGCTGCTGCC GCGGGAGCCG
GACCTGATGG AGATGTTCGG CGTGAGCCGC ACGGTGCTGC GCGAGGCGCT GCGCACGCTG
ACGTCGAAGG GGCTGGTCGA ATCGCGGCCG AAGGTCGGCA CGCGGGTGCG GCCGCGCCGC
GCGTGGAACC TGCTCGATGC CGACCTGCTC GACTGGTATG CGCGGGTCGC GCCGCCGCTC
GCGTTCGCGC TCAAGCTTCA GGAGATGCGT GAAATGATCG AGCCGCACGC GGCCGCGCTG
GCCGCGCGTT CGCACGGGGC GGCCGCGTTC GACGCGATCG ACGACGCGGT GCGCGCGATG
GCCGCCGCGC GCAACGTCGA CGAATGGGTG CGCGCGGACC TGCGCTTTCA TCTGAGCGTG
CTGGAGGCCG GCGGCAACGA GTTGCTGGTG CCGCTCGGCG CGCTGATCGA CCGCACACTC
GAGGCGCAGC TGCACCTGAA CGCGCGCCGG GCGCACGTGT TCAATGCGTC GCTCGCCGAG
CATGCGGCCG TCGCCGACGC AATCGGCGTG CGCGACGAGG ACGGCGCGCG CCGCGCGATG
GCGTCGCTGC TCGCGATCAC GCGCGCGCGG ATCGAGATGT CGTGA
|
|---|
| Protein sequence | MPGERRTIIQ RDLHGQTSFR LATAILRGDY PPESLLPREP DLMEMFGVSR TVLREALRTL
TSKGLVESRP KVGTRVRPRR AWNLLDADLL DWYARVAPPL AFALKLQEMR EMIEPHAAAL
AARSHGAAAF DAIDDAVRAM AAARNVDEWV RADLRFHLSV LEAGGNELLV PLGALIDRTL
EAQLHLNARR AHVFNASLAE HAAVADAIGV RDEDGARRAM ASLLAITRAR IEMS
|
|---|
| |