| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2582 |
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| Symbol | |
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| ID | 6177678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2865679 |
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| End bp | 2866881 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682358 |
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| Product | porin |
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| Protein accession | YP_001809275 |
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| Protein GI | 172061623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AGCTGTTGGC CGGCGCGGGT GTCGCGCTGA TCGCGGGTGC GGCGCACGCC
CAGAGCAGCG TCACGCTGTA CGGGATTATC GATGAAGGGC TGACCTATGC GAGCAACATC
GCGACGCCCG GCCCGCACGG CGCGGTGAGC GGCAAGCCCG CGCTGCGAAT GCTGGGCGGC
GTGCAGCAGG CGAGCCGCTG GGGGCTGCGC GGCAGCGAGG ATCTCGGCGG CGGCCTGGCC
GCGGTCTTCA CGCTCGAGAA CGGTTTCGAT CCGAGCAGCG GCAGGCTCGG GCAGGGCGGG
CTGATGTTCG GCAAGAAGGC GTTCGTCGGG CTGTCGGGGC CGTTCGGCAC CGTCACGCTC
GGGCGGCAGT ACGACTCCAA CGTCGATATC CTCGGGCCGC TCGAGGCCGC CGCGCTGTTC
GGCGGCTACA TGGTCGCGCA CCCCGGTGAC CTCGACAACG TGAACAACGC GAACTCGACC
AACAACGCGA TCAAGTTCAC GAGCAAAGAC TACGGCGGGG CTCGCGTCGC GGCGATGTAC
GGGGTGGGCG GCATCGCGGG CGCGGCGACG CGCAACCAGG TGTGGTCGGC CACCGTCGGC
TACACGCGCG GGCCGCTCGC GGTGGCGGCC GGCTATCTGA ATGCGCGCAA TCCGAACGTG
TCGTTCTTCG GCACGACCGG CAGCCCCGCG CCGACCGTGG GCGGCGTGCC GGGCAGCAAC
ATGCTGTCGC CGGTGTATTC GGGCTATGCG TCCGCGCGCA CGCTGCAGGT CGCGGTGGTG
GGCGGCACCT ATGCGATCGG CGCGATGACG CTCGGCGCGA TGTATACGAA CACGTCGTTC
CGCCAGCTCG GTGACCTGTC GTCCGGGCCG AACCCGGGCG GCGTGTCCGG CAACGCGGTG
TTCAACAACG TGGAGGCGAG CGTGCGCTAC CAGTTCATGA CCTCGCTGTT CGGCGGCGTG
GCGTACGACT ACACGCATGG CGGCGGCGTG AACGGCCGCG ACGGTGCGAC GTATCACCAG
GTCGCGGCGG GGCTCGACTA CTTCCTGTCG AAGCGCACCG ACGTCTACGT GAGCGCCGTT
TATCAGCGCG CATCGGGCAC CGACTCGACG GGGCACGTCG CTGTCGCGGC GATCAACGGG
CCCGGTGCAT CCGCGAACGA TCGGCAGCTG CAGGCGCGCG TCGGCATGCG GCACAAGTTC
TGA
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| Protein sequence | MKKKLLAGAG VALIAGAAHA QSSVTLYGII DEGLTYASNI ATPGPHGAVS GKPALRMLGG
VQQASRWGLR GSEDLGGGLA AVFTLENGFD PSSGRLGQGG LMFGKKAFVG LSGPFGTVTL
GRQYDSNVDI LGPLEAAALF GGYMVAHPGD LDNVNNANST NNAIKFTSKD YGGARVAAMY
GVGGIAGAAT RNQVWSATVG YTRGPLAVAA GYLNARNPNV SFFGTTGSPA PTVGGVPGSN
MLSPVYSGYA SARTLQVAVV GGTYAIGAMT LGAMYTNTSF RQLGDLSSGP NPGGVSGNAV
FNNVEASVRY QFMTSLFGGV AYDYTHGGGV NGRDGATYHQ VAAGLDYFLS KRTDVYVSAV
YQRASGTDST GHVAVAAING PGASANDRQL QARVGMRHKF
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