| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2576 |
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| Symbol | |
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| ID | 6178955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2859930 |
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| End bp | 2861588 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682351 |
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| Product | general substrate transporter |
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| Protein accession | YP_001809269 |
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| Protein GI | 172061617 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.598337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCT TAGGCGGGCA AATTTCGCAC TCGCCGATGA CGGCCGAAGA AAAGAAGGTG
ATCTTCGCGT CGTCGCTCGG CACCGTGTTC GAGTGGTACG ACTTTTACCT GGCCGGGTCA
CTCGCGGCCT ACATCAGCAA GAGCTTCTTC TCCGGGGTCA ATCCGACCGC CGCCTTCATC
TTCACGCTGC TCGGCTTCGC GGCCGGCTTC GCCGTGCGGC CGTTCGGCGC GATCGTGTTC
GGCCGGCTCG GCGATCTCGT CGGCCGCAAG CACACGTTCC TTGTGACGAT CGTGATCATG
GGCATCTCGA CCTTCGTGGT CGGCTTCCTG CCCGGCTACA CGACGATCGG CATCGCGGCG
CCCGTGATCT TCATCGCGAT GCGGCTGCTG CAGGGCCTCG CGCTCGGCGG CGAGTACGGC
GGCGCGGCGA CCTACGTCGC CGAGCATGCG CCGGCGAACC GTCGCGGCTT CTACACCGCG
TGGATCCAGA CGACCGCGAC GCTCGGCCTG TTCCTGTCGC TGCTCGTGAT CCTCGGCGTA
CGCACGTTCA TCGGCGAGGA AGCATTCGGC AACTGGGGCT GGCGCGTGCC GTTCGTCGCG
TCGATCCTGC TGCTCGCGGT GTCGGTGTGG ATCCGGTTGC AGCTGAATGA ATCGCCGGTG
TTCCTGCGCA TCAAGGCCGA GGGCAAGACG TCGAAGGCGC CGCTGACCGA AGCGTTCGGC
CAGTGGAAGA ACCTGAAGAT CGTGATCCTC GCGCTCGTCG GCCTGACCGC CGGCCAGGCC
GTCGTCTGGT ACACGGGGCA GTTCTACGCG CTGTTCTTCC TCACGCAGAC GCTGAAGGTC
GACGGTGCCA GCGCGAACAT CCTGATCGCG ATCGCGCTCC TGATCGGCAC GCCGTTCTTC
CTGTTCTTCG GCTCGCTGTC GGACCGGATC GGCCGCAAGC CGATCATTCT CGCCGGCTGC
CTGATCGCGG CGCTCACCTA CTTCCCGCTG TTCAAGGCGC TCACGCACTA CGCGAACCCG
CAGCTCGAAC TCGCGACGCA GAAGGCACCG ATCTCGGTCA TCGCCGATCC GGCCACCTGC
TCGTTCCAGT TCAACCCGGT GGGCACGTCG AAGTTCACGA GCTCGTGCGA CATCGTGAAG
AGCGCGCTCG CGAAGGCCGG CCTGAACTAC GAGAACGTCG CGGCGCCGGC AGGCTCGACC
GCGCAGATCA AGGTGGGTGA CACGGTGATC CCGGCCTATG ACGGCAAGGC GCCCGATGCG
AAGGCGCAGG GCGCGGCGTT CGACAAGACG CTCGCGTCGA CGCTGAAGGG CGCCGGCTAT
CCGGCCAAGG CCGACCCGGC GCAGCTCAAC TGGCCGATGA CGATCGTGAT ACTGACGATC
CTCGTGATCT ACGTGACGAT GGTCTACGGC CCGATCGCCG CGATGCTGGT CGAGATGTTC
CCGACGCGGA TCCGCTACAC GTCGATGTCG CTGCCCTATC ACATCGGTAA CGGCTGGTTC
GGCGGCTTCC TGCCGGCGAC CGCGTTCGCG ATCGTCGCGG CGAAGGGCAA CATCTATTCG
GGGCTCTGGT ATCCGATCGT GATCGCGCTG GCCACGTTCG TGATCGGTCT GCTGTTCGTC
AAGGAGACGA AGGACTCGAA CATCTACGCG CAGGATTGA
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| Protein sequence | MATLGGQISH SPMTAEEKKV IFASSLGTVF EWYDFYLAGS LAAYISKSFF SGVNPTAAFI
FTLLGFAAGF AVRPFGAIVF GRLGDLVGRK HTFLVTIVIM GISTFVVGFL PGYTTIGIAA
PVIFIAMRLL QGLALGGEYG GAATYVAEHA PANRRGFYTA WIQTTATLGL FLSLLVILGV
RTFIGEEAFG NWGWRVPFVA SILLLAVSVW IRLQLNESPV FLRIKAEGKT SKAPLTEAFG
QWKNLKIVIL ALVGLTAGQA VVWYTGQFYA LFFLTQTLKV DGASANILIA IALLIGTPFF
LFFGSLSDRI GRKPIILAGC LIAALTYFPL FKALTHYANP QLELATQKAP ISVIADPATC
SFQFNPVGTS KFTSSCDIVK SALAKAGLNY ENVAAPAGST AQIKVGDTVI PAYDGKAPDA
KAQGAAFDKT LASTLKGAGY PAKADPAQLN WPMTIVILTI LVIYVTMVYG PIAAMLVEMF
PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAAKGNIYS GLWYPIVIAL ATFVIGLLFV
KETKDSNIYA QD
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