Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2551 |
Symbol | |
ID | 6178829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2833445 |
End bp | 2834368 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682326 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001809244 |
Protein GI | 172061592 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.317698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.771861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAATGG CCGACCGCGA CGGCAAGATC TGGATGGACG GCAAGCTGAT CGACTGGCGC GACGCCACGA TCCACGTCCT GACCCACACG CTGCACTACG GCATGGGCGT CTTCGAGGGC GTGCGCGCGT ACCGGACGGC CGACGGCAGC ACCGCGATCT TCCGCCTGCA CGAGCACACC AAACGTCTGC TGAATTCGGC GAAGATCTTC CAGATGGACG TGCCGTTCGA CCGGGAAACC CTCGAAGCCG CGCAGCTCGA CGTCGTGCGC GAGAACAAGC TCGAGTCGGG CTACCTGCGC CCGATCATCT GGGTCGGCTC GGAAAAGCTC GGCGTGTCCG CGAAGGGCAA CACGATCCAC GTCGCGATCG CCGCGTGGCC GTGGGGCGCG TACCTCGGCG AGGAAGGCCT CGCGAAGGGC ATCCGCGTGA AGACGTCGTC GTTCACGCGC CACCACGTGA ACGTGTCGAT GGTGCGCGCG AAGGCGTCGG GCTGGTACGT GAACTCGATC CTCGCGAACC AGGAAGCAAC CGCCGACGGC TACGACGAAG CGCTGCTGCT CGACGTCGAC GGCTACGTGT CGGAAGGCTC CGGCGAGAAC TTCTTCCTGG TGAACAACGG CAAGCTGTAC ACGCCCGACC TGTCGTCGTG CCTCGACGGC ATCACGCGCG ACACGATCAT CACGCTCGCG CGGGACGCAG GCATCCAGGT GATCGAGAAG CGCATCACGC GCGACGAGGT CTACACGGCC GACGAAGCGT TCTTCACGGG CACGGCCGCC GAAGTCACGC CGATCCGCGA ACTCGACAAC CGCACGATCG GCAGCGGCGC GCGCGGCCCC GTGACGGAAA AGCTCCAGTC GGCGTTTTTC GATATCGTGT CGGGCAAGAA CGCGAAGTAC GCGCACTGGC TGACGAAGGT CTGA
|
Protein sequence | MSMADRDGKI WMDGKLIDWR DATIHVLTHT LHYGMGVFEG VRAYRTADGS TAIFRLHEHT KRLLNSAKIF QMDVPFDRET LEAAQLDVVR ENKLESGYLR PIIWVGSEKL GVSAKGNTIH VAIAAWPWGA YLGEEGLAKG IRVKTSSFTR HHVNVSMVRA KASGWYVNSI LANQEATADG YDEALLLDVD GYVSEGSGEN FFLVNNGKLY TPDLSSCLDG ITRDTIITLA RDAGIQVIEK RITRDEVYTA DEAFFTGTAA EVTPIRELDN RTIGSGARGP VTEKLQSAFF DIVSGKNAKY AHWLTKV
|
| |