Gene BamMC406_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2545 
Symbol 
ID6178784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2826515 
End bp2827405 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID641682320 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001809238 
Protein GI172061586 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.846517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC TTTACGAATC CACGCTCCGT TCGCTGCCGC TCCTCGGTCG CGGCAAGGTC 
CGCGACAACT ACGCGGTCGG CAACGACAAG CTCCTGATCG TCACGACCGA TCGCCTGTCG
GCATTCGACG TGATCATGGG CGAGCCGATT CCGAACAAGG GCCGCGTGCT GAACCAGATG
GCGAACTTCT GGTTCGACAA GCTCGCGCAC ATCGTGCCGA ACCACCTGAC GGGCGACGCG
CCGGAAGCGG TCGTCGCGGC CGACGAGATC GAGCAGGTCA AGGGCCGCGG CGTGGTCGTC
AAGCGCCTCG AGCCGATCAT GATCGAAGCG GTCGTGCGCG GCTACCTGGC CGGCAGCGGC
TGGAAGGAAT ACCAGGCGTC GGGCGCCGTG TGCGGCGTGC AGTTGCCGGC AGGCCTGCAG
AACGCGCAGA AGCTGCCCGA GCCGATCTTC ACGCCGGCCG CGAAGGCCGA ACTCGGCGAG
CACGACGAGA ACATCACGTT CGAGGAAACC GAGCGCCGCA TCGGCACCGA GCTGGCCGCG
ACGATTCGCG ACATCTCGAT CCGCCTGTAC AAGGAAGCGG CCGACTACGC GGCGACGCGC
GGCATCATCA TCGCCGACAC GAAGTTCGAA TTCGGCCTCG ACAATCACGG CAAGCTGTAC
CTGATGGACG AAGTGCTGAC GGCCGATTCG TCGCGCTTCT GGCCGGCCGA CCAGTACCAG
GTCGGCACCA ACCCGCCGTC GTTCGACAAG CAGTTCGTGC GCGACTGGCT CGAGGCGCAG
CCGTGGGGCA AGACCGCGCC GGCGCCGGCG CTGCCGGCCG ACGTCGTCGA GAAGACGGCC
GCGAAGTACC AGGAAGCGCT CGAGCGCATC ACCGGCCAGC CGCTCGCCTG A
 
Protein sequence
MSTLYESTLR SLPLLGRGKV RDNYAVGNDK LLIVTTDRLS AFDVIMGEPI PNKGRVLNQM 
ANFWFDKLAH IVPNHLTGDA PEAVVAADEI EQVKGRGVVV KRLEPIMIEA VVRGYLAGSG
WKEYQASGAV CGVQLPAGLQ NAQKLPEPIF TPAAKAELGE HDENITFEET ERRIGTELAA
TIRDISIRLY KEAADYAATR GIIIADTKFE FGLDNHGKLY LMDEVLTADS SRFWPADQYQ
VGTNPPSFDK QFVRDWLEAQ PWGKTAPAPA LPADVVEKTA AKYQEALERI TGQPLA