Gene BamMC406_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2496 
Symbol 
ID6178576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2771103 
End bp2771744 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID641682272 
Productarylformamidase 
Protein accessionYP_001809190 
Protein GI172061538 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR03035] arylformamidase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.605648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.755964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAC TCTGGGACAT CTCGCCGCCC GTCAGCCCCG CCACCCCCGT GTGGCCGGGC 
GACACGCCCG TTTCCGTCGA ACGCGTGTGG CGGATGGAGG CCGGCTCGCC GGTCAACGTC
GCGCGCCTGA CGCTGTCGCC GCATACGGGC GCGCACTGCG ATGCGCCGCT CCACTATGAC
GCCGACGGCG CGCCGATCGG CGCGGTGCCG CTCGATACCT ATCTCGGCCC GTGCCGCGTG
ATCCACTGCA TCGGCGCGGC GCCGGTCGTG CGCCCGGCCG ATATCGAGGC CGCGCTCGAC
GGCGTGCCGC CGCGCGTGCT GCTGCGCACC TATGCACGCG CCAGCGTCGA GCAATGGGAC
AGCGGCTTCT GCGCGGTCGC GCCCGAGACC GTCGACCTGC TCGCCGCGCG CGGCGTGAAG
CTGATCGGCA TCGACACGCC GTCGCTCGAC CCGCAGGAAT CGAAGACCAT GGATGCGCAT
CATCGCGTGC GCGCACACCG GATGGCGATC CTCGAAGGGA TCGTGCTCGA CGACGTGCCG
CCCGGCGACT ACGAGCTGAT CGCGCTGCCG CTGAAGTTCA CGACGCTCGA CGCGAGCCCC
GTACGTGCGG TGCTGCGCGC GCTGCCCGGC CACTCCGCCT GA
 
Protein sequence
MDTLWDISPP VSPATPVWPG DTPVSVERVW RMEAGSPVNV ARLTLSPHTG AHCDAPLHYD 
ADGAPIGAVP LDTYLGPCRV IHCIGAAPVV RPADIEAALD GVPPRVLLRT YARASVEQWD
SGFCAVAPET VDLLAARGVK LIGIDTPSLD PQESKTMDAH HRVRAHRMAI LEGIVLDDVP
PGDYELIALP LKFTTLDASP VRAVLRALPG HSA