| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2485 |
|---|
| Symbol | |
|---|
| ID | 6178362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2760517 |
|---|
| End bp | 2761365 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641682261 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001809179 |
|---|
| Protein GI | 172061527 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.194267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCA CGCTTGCCAC TTTCGAGAAA GACGTCATCG AGGCGTCGCT GGACGCCCCC
GTGCTGGTCG ACTTCTGGGC GCCGTGGTGC GGCCCCTGCA AGACGCTCGG TCCGCTGCTC
GAAAAGCTCG AAGCCGACTA CCAGGGCCGC TGGAAGCTCG TGAAGGTGAA CGTCGACGAG
AACCAGGAGC TCGCCGCGCA CTTCCAGACG CGCAGCATCC CGCACGTGAT CGCGTTCGCC
GACGGGCGTC CGGTCGACCA GTTCATCGGC GTGCTGCCGG AAGGCCAGTT GCGCGCGTTC
CTCGACCGGC TGCTGCCGGC GCCCGAGGAA GCCGAACGCC GCGCCGCGCA ATACGCGATC
GCCGAGTCAC GCTACGACGA TGCGCTCACC CACCTCGAGG CGGCGCTCGC GCTGAACCCT
GGTTTCGACG ATGCGCGGCT CGACCTGATC GAACTGCTGC TCGCGAACAA CCAGGTCGAT
GCCGCGCGCA CCGAGGCCGA GCGCTTGTCG CCGCAGACCG TGCAGGGCGC CGATCCGCGC
TACCAGGCGA TCAAGACCCG TTTCGATGCG CTCGACGCGA CGGCCGACCT GCCGCCGACC
GACGCGCTCG AAGCGCGTAT CGCGGCGAAC CCCGCGGATC TCGACGCACG CTTCGACCTC
GCGCAGAGCC TGATCGCGCG ACGCGCGTAC GAAGGCGCGC TCGAACAGCT GCTGGAAATC
GTGATGCGCG ACCGCGCGTA TGGCGACGAT CTCGGCCGCC GCACGATGCT GTCGGTGTTC
GAGATGGCGG GCGACAGCCC CGAGCTCGTC GCCGCGTGGC GGCGCAAGCT GAGCATGGCG
CTCAACTGA
|
|---|
| Protein sequence | MDTTLATFEK DVIEASLDAP VLVDFWAPWC GPCKTLGPLL EKLEADYQGR WKLVKVNVDE
NQELAAHFQT RSIPHVIAFA DGRPVDQFIG VLPEGQLRAF LDRLLPAPEE AERRAAQYAI
AESRYDDALT HLEAALALNP GFDDARLDLI ELLLANNQVD AARTEAERLS PQTVQGADPR
YQAIKTRFDA LDATADLPPT DALEARIAAN PADLDARFDL AQSLIARRAY EGALEQLLEI
VMRDRAYGDD LGRRTMLSVF EMAGDSPELV AAWRRKLSMA LN
|
|---|
| |