| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2468 |
|---|
| Symbol | |
|---|
| ID | 6178396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2743692 |
|---|
| End bp | 2744546 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641682244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001809162 |
|---|
| Protein GI | 172061510 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00867567 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCG CAATGACCCG CGTCCTCGAC TACTTCAGCA CGCTCGTGGC GGACGACGAC
AGCCTGCCCG TCACGGAGAC CGCGCTGTCG CTCGCACAGG ACGCCTATCC CGACCTCGAC
CTGCAGGGCA CGCTGGCCGA ACTCGACATG CTCGCCGCGC GGCTGCGCCG CCGGCTCGCC
GACGATGCGA ACCTGAAGGA CCGCGTCGCC GCGCTCAACG AATTCTTCTT TCGCGAACTC
GGCTTCGCGT GCAATCACAA CGATTACTAC GACCCCGATA ACAGCCACCT GAACGCGGTG
CTCAAGCGCC GGCGCGGGAT TCCGATCTCG CTGTCGGTGC TGTACCTCGA GCTCGCCGAG
CAGATCGGCG TGCCGGCGCG CGGCGTGTCG TTCCCCGGCC ATTTCCTGCT GCGCGTGACG
CTGCCGGACG GCGACCTGAT CATCGATCCG ACCAACGGCC ATTCGCTGTC CGAAGCCGAG
ATGGTCGAGA TGCTCGAGCC GTACGTCGCG CGGGCGGCGG GCGCGGTCGA CAGCGCGTTG
CGCGCGTTGC TGCAGCCGGC CACGAGCCGC GAGATCATCG CGCGGATGCT GCGCAACCTG
AAGACGATCT ATCTGCAGAC GGAACGCTGG CAGCGGCTGC TGGCGGTGCA GCAGCGGCTC
GTGATCCTGC TGCCGCAGCA GCTCGACGAA GTGCGCGACC GCGGCTTCGC GTATGCGCGG
CTCGACTACC TGCGCCCCGC GCTCGAGGAT CTCGAGCAGT ATCTCGGCGA GCGGCCCGAT
GCGGACGACG CAACCGTCGT CGAATCGCAG GTGACGGAAT TGCGGCAGCG GATGCAGCGC
GACGACGAGG ACTGA
|
|---|
| Protein sequence | MTTAMTRVLD YFSTLVADDD SLPVTETALS LAQDAYPDLD LQGTLAELDM LAARLRRRLA
DDANLKDRVA ALNEFFFREL GFACNHNDYY DPDNSHLNAV LKRRRGIPIS LSVLYLELAE
QIGVPARGVS FPGHFLLRVT LPDGDLIIDP TNGHSLSEAE MVEMLEPYVA RAAGAVDSAL
RALLQPATSR EIIARMLRNL KTIYLQTERW QRLLAVQQRL VILLPQQLDE VRDRGFAYAR
LDYLRPALED LEQYLGERPD ADDATVVESQ VTELRQRMQR DDED
|
|---|
| |