| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2459 |
|---|
| Symbol | |
|---|
| ID | 6178296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2734887 |
|---|
| End bp | 2735594 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682235 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_001809153 |
|---|
| Protein GI | 172061501 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000341213 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCGT CGCTCGCCCC CTACCTGCCG CAGATCGAAG CGCACCCGTG GTTCGCCGCG
CTGCCGCCCC CGTTGCGCGC CGACCTGCTC GCCCGCGCCG CGGTGCGGCG CCTGCCGGCC
GGCCACGCGC TGTTCCGCCG CGGCGACCCG CCATGCGGGC TGTATGCGGT GCTGGCCGGC
TCCCTCACCA TAGGCGCGGT GGATCCGCAG GGCAAGGAAG CGCTGCTGAT AGTCGCCGAA
CCCGTCATGT GGTTCGGCGA GATCGCGCTG TTCGACGGCC AGCCGCGCAC TCACGATGCG
ATCGCGCTCG ACGACACGCT GCTGCTGCAC GTCCCGCAGG CCGCGCTGCT CGCGATTCTC
GACACGACGC CCCAGTACTG GCGGCAGTTC GCGCTCTTGA TGGCGCAAAA GCTTCGGCTG
AGCCTCCTGA GAGTCGAATC GATGAACGTG ATGCCGGCCG CGCAGCGGCT CGCCGCGCGG
CTGCTGATGA TTGCCGAGGG CTACGGCGGG ATCAGCGCCG GCCACACGCA CATCCGGCTG
TCGCAGGAAA AGCTTGCGGC GATGCTGTCG CTGACGCGGC AGACCACCAA CCAGCTGCTG
AAGGCGCTGC AGGCCGACGG CGTCGTGCGG CTGCACGTCG GCGAGATCGA GCTCGTCGAC
GTCGACGCGC TGCGCCGCGC GAGCGGATTG CCCGGCAGCA CGGACTGA
|
|---|
| Protein sequence | MPSSLAPYLP QIEAHPWFAA LPPPLRADLL ARAAVRRLPA GHALFRRGDP PCGLYAVLAG
SLTIGAVDPQ GKEALLIVAE PVMWFGEIAL FDGQPRTHDA IALDDTLLLH VPQAALLAIL
DTTPQYWRQF ALLMAQKLRL SLLRVESMNV MPAAQRLAAR LLMIAEGYGG ISAGHTHIRL
SQEKLAAMLS LTRQTTNQLL KALQADGVVR LHVGEIELVD VDALRRASGL PGSTD
|
|---|
| |