| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2436 |
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| Symbol | |
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| ID | 6177324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2704830 |
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| End bp | 2707130 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641682212 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001809130 |
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| Protein GI | 172061478 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0100444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000629584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATTGCCC AGGAATTGGA AGTCAGCCTG CACATGGCGT TCATGGAAGC ACGCCAGGCG
CGCCATGAGT TCATTACGGT CGAGCATCTG CTGCTGGCCC TGCTGGATAA TCCGACGGCA
GCCGAGGTGT TGCGCGCGTG TGCGGCCAAC ATCGAGGACT TGCGTCAGAA CCTGCGCAAT
TTCATCCACG ACAACACACC GACCGTCCCC GGTACCGACG ATGTCGATAC CCAGCCGACG
CTCGGTTTCC AGCGCGTGAT TCAGCGCGCG ATCATGCACG TCCAGTCGAC GTCGAACGGC
AAGAAGGAAG TCACCGGCGC GAACGTGCTG GTCGCGATCT TCGGCGAGAA GGATTCGCAC
GCCGTCTACT ACCTGCAGCA GCAGGGCGTC ACGCGCCTGG ACGTCGTGAA CTTCATTTCG
CACGGCATCG CGAAGACGAA CGGCGGCGAA GCCGCGAAGT CGACCGACGC GAACGCGGAA
AGCGAAGACG CGAACGCGCA GAAGGAAACG CCGCTCGCGC AGTTCACGCA GAACCTGAAC
CAGATGGCGA AGGACGGCCG CATCGATCCG CTGATCGGCC GCGAGCCGGA GGTCGAGCGC
GTCGTGCAGG TGCTGTGCCG CCGCCGCAAG AACAATCCGC TGCTCGTGGG CGAAGCGGGG
GTGGGCAAGA CCGCGATCGC GGAAGGGCTC GCCTATCGCA TCACGCGCGG CGAAGTGCCG
GACATCCTCG CGAACGCGCA GGTGTATTCG CTCGACATGG GCGCGCTCCT CGCGGGCACC
AAGTATCGCG GCGACTTCGA GCAGCGTCTG AAGACGGTGC TGAAGGAGCT GAAGGAGCGT
CCGCACGCGA TCCTGTTCAT CGACGAGATC CACACGCTGA TCGGCGCGGG CGCCGCATCG
GGCGGCACGC TCGACGCGTC GAACCTGCTG AAGCCGGCGC TGTCGTCGGG CACGCTCAAG
TGCATCGGCG CGACCACGTT CACCGAGTAT CGCGGCATCT TCGAGAAGGA TGCGGCGCTG
TCGCGGCGCT TCCAGAAGGT CGACGTGACG GAGCCGACCG TCGAGCAGAC GGTCGCGATC
CTGCGCGGGC TGAAGTCGCG ATTCGAGGAG CATCACGGCG TCAAGTATTC GTCGGGCGCA
CTGTCGGCCG CGGCCGAATT GTCGGCACGC TTCATCACCG ACCGCCACCT GCCGGACAAG
GCGATCGACG TGATCGACGA AGCGGGCGCC GCGCAGCGCA TCCTGCCGAA GTCGAAGCAG
AAGAAGACGA TCGGCAAGAG CGAGATCGAG GAAATCATCT CGAAGATCGC GCGCGTGCCG
GCGCAAAGCG TGTCGCAGGA CGATCGCAGC AAGCTGCAGA CGCTCGATCG CGACCTGAAG
AGCGTCGTGT TCGGCCAGGA TCCGGCGATC GATGCGCTCG CCGCATCGAT CAAGATGGCG
CGTGCGGGCC TCGGCAAGAT GGACAAGCCG ATCGGCTCGT TCCTGTTCTC CGGCCCGACG
GGCGTCGGCA AGACCGAAGT GGCGCGCCAG CTCGCGTTCA CGCTCGGCAT CGAGCTGATC
CGCTTCGACA TGTCGGAATA CATGGAGCGT CACGCGGTGA GCCGCCTGAT CGGCGCGCCG
CCGGGCTACG TCGGGTTCGA CCAGGGCGGC CTGCTGACCG AAGCCGTCAC GAAGAAGCCG
CATTGCGTGC TGTTGCTCGA CGAAATCGAG AAGGCGCATC CGGACATCTT CAACGTGCTG
CTGCAGGTGA TGGACCACGG CACGCTGACG GACAACAACG GCCGCAAGGC GGATTTCCGC
AACGTCATCA TCATCATGAC GACGAACGCG GGCGCCGAGT CGATGCAGAA GGCGACGATC
GGATTCACGA CGCGCCGCGA GACGGGCGAC GAGATGACCG ACATCAAGCG TCTGTTCACG
CCGGAGTTCC GCAACCGCCT GGATTCGATC ATCAGCTTCC GCTCGCTCGA TGAGGAAATC
ATCATGCGCG TGGTCGACAA GTTCCTGATC CAGCTCGAGG AGCAGCTGCA CGAGAAGAAG
GTCGACGCGC TGTTCACCGA CGCGTTGCGC AAGCATCTCG CGAAGCACGG CTTCGACCCG
CTGATGGGCG CGCGGCCGAT GCAGCGGCTG ATCCAGGACA CGATCCGTCG TGCGCTGGCC
GACGAGCTGC TGTTCGGCAA GCTCGTCAAC GGCGGGCACG TGACGGTCGA CGTCGACGAA
AACGACAAGG TTCAGTTGTC GTTCGACAAG CTGGCGAATC CGCCGCACAA GCCGAACGAA
GAGACGGTCG AAGTCGAGTA A
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| Protein sequence | MIAQELEVSL HMAFMEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRQNLRN
FIHDNTPTVP GTDDVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH
AVYYLQQQGV TRLDVVNFIS HGIAKTNGGE AAKSTDANAE SEDANAQKET PLAQFTQNLN
QMAKDGRIDP LIGREPEVER VVQVLCRRRK NNPLLVGEAG VGKTAIAEGL AYRITRGEVP
DILANAQVYS LDMGALLAGT KYRGDFEQRL KTVLKELKER PHAILFIDEI HTLIGAGAAS
GGTLDASNLL KPALSSGTLK CIGATTFTEY RGIFEKDAAL SRRFQKVDVT EPTVEQTVAI
LRGLKSRFEE HHGVKYSSGA LSAAAELSAR FITDRHLPDK AIDVIDEAGA AQRILPKSKQ
KKTIGKSEIE EIISKIARVP AQSVSQDDRS KLQTLDRDLK SVVFGQDPAI DALAASIKMA
RAGLGKMDKP IGSFLFSGPT GVGKTEVARQ LAFTLGIELI RFDMSEYMER HAVSRLIGAP
PGYVGFDQGG LLTEAVTKKP HCVLLLDEIE KAHPDIFNVL LQVMDHGTLT DNNGRKADFR
NVIIIMTTNA GAESMQKATI GFTTRRETGD EMTDIKRLFT PEFRNRLDSI ISFRSLDEEI
IMRVVDKFLI QLEEQLHEKK VDALFTDALR KHLAKHGFDP LMGARPMQRL IQDTIRRALA
DELLFGKLVN GGHVTVDVDE NDKVQLSFDK LANPPHKPNE ETVEVE
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