Gene BamMC406_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2432 
Symbol 
ID6177347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2700663 
End bp2701874 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID641682208 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_001809126 
Protein GI172061474 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.708017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000780927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCACACG CAGAACTCGC TGGAAAACAC CTCGTTCTCG GCCTGACGGG CGGCATCGCC 
TGCTACAAGA TCGCCGAGCT CACCCGGCTG CTGACGAAGG CAGGCGCGAC CGTGCAGGTC
GTGATGACCG AAGCCGCCGC GCAGTTCATC ACGCCCGTCA CGATGCAGGC GCTGTCCGGC
CGGCCCGTCT ATACGAGCCA GTGGGACGCG CGCATCGACA ACAACATGGC GCACATCGAC
CTGTCGCGCG AAGCCGACGC GATCGTGATC GCGCCCGCGT CGACGGATTT CCTCGCGAAG
CTCGCGCACG GTTTCGCGGA CGACCTGCTG TCGACGCTGT GCGTCGCGCG CGACTGTCCG
CTGCTCGTCG TGCCCGCGAT GAACCGCCAG ATGTGGCAGA ACCCGGCCAC GCAACGCAAT
GCCGCGCAAC TGCGCGCCGA CGGCGTGTCG GTGCTCGGCC CCGATTCGGG CGCGCAGGCC
TGCGGCGAAG TCGGCGACGG CCGCATGCTC GAACCCGAGG CGATCCATGA AGCGATCGTC
GCGCACTTCG CACCGAAGGT GCTCGCGCAC CGTCGCGTGC TGATCACGGC CGGCCCGACG
TTCGAGCCGC TCGACCCGGT GCGCGGCCTC ACGAACCGCT CGAGCGGCAA GATGGGCTTC
GCGCTCGCGC GCGCCGCGCA GCAGGCCGGC GCCGACGTGC ATCTCGTCGC GGGGCCGGTC
GCGCTCGACA CGCCGTGGGG CGTGACGCGC CAGGACGTGC AGACCGCGCA GCAGATGTAC
GACGCGGTCA TGCATGCGGT AACCGACGCG GACATCTTCA TCGCGGTGGC CGCGGTCGCC
GACTGGCGCG TCGACCAGCC GGCCGAGCAC AAGATGAAGA AGACGGCCGA TCGCAAGATG
CCGGCGCTCG CGTTCGTCGA GAACCCCGAC ATCCTCGCAT CGGTCGCGGC GCTGCCCGAT
CCGCCGTTCT GCGTCGGTTT CGCCGCCGAA AGCGGCGACC TCGACGTGCA TGGCGACGAA
AAGCGCAAGC GCAAGAACGT GCCGCTGCTG GTCGGCAACC TCGGCCCGCT GACGTTCGGC
CGCGACGACA ACGAAGTCGT ATTGTTCGAG GCAGCCGGGC TCACGCGCCT GCCGCGCGCA
CCGAAGGACG AGCTCGCGCA CGCGCTCGTC GCCGAAATCG CGAAGCGTCT GCCCGACAAT
CACCTGATCT GA
 
Protein sequence
MAHAELAGKH LVLGLTGGIA CYKIAELTRL LTKAGATVQV VMTEAAAQFI TPVTMQALSG 
RPVYTSQWDA RIDNNMAHID LSREADAIVI APASTDFLAK LAHGFADDLL STLCVARDCP
LLVVPAMNRQ MWQNPATQRN AAQLRADGVS VLGPDSGAQA CGEVGDGRML EPEAIHEAIV
AHFAPKVLAH RRVLITAGPT FEPLDPVRGL TNRSSGKMGF ALARAAQQAG ADVHLVAGPV
ALDTPWGVTR QDVQTAQQMY DAVMHAVTDA DIFIAVAAVA DWRVDQPAEH KMKKTADRKM
PALAFVENPD ILASVAALPD PPFCVGFAAE SGDLDVHGDE KRKRKNVPLL VGNLGPLTFG
RDDNEVVLFE AAGLTRLPRA PKDELAHALV AEIAKRLPDN HLI