| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2368 |
|---|
| Symbol | cobS |
|---|
| ID | 6178533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2638280 |
|---|
| End bp | 2639059 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682142 |
|---|
| Product | cobalamin synthase |
|---|
| Protein accession | YP_001809062 |
|---|
| Protein GI | 172061410 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCTG AGCGCGCGCG CGGCGGCGTA CGCGCCGAAC TGCGCTACTT CTTCGTCGCG
CTCGGCTATT TCACGCGCGT GCCGGTGCCG CGCGCGATCG GCTATGCGGC CGGCGATCTC
GATCAGGCCG CGCGTTACTT CCCGCTCATC GGCGCATGCG TCGGTGCGTG GGGCGCGCTC
GTCTATCTTG CGGCGCTGCG CGTGCTGCCC GCGTCGATCG CGGTGGGCCT GTCGATGGCC
GCGACGCTGC TCGCGACCGG CGCGTTCCAC GAGGATGGCC TGGCCGACAG CTGCGATGCG
TTCGGCGGCG GCTATACGCG CGAAGACGTG CTGCGGATCA TGCACGACTC GCGCATCGGC
ACGTTCGGCG CGGCCGCGCT CGTGATCACG CTCGGCCTGA AATGGCAGGC GCTCGCGGCC
ATGCCGCCGC TGCGCGCCGC GTGGACGATG GTCGCCGCGC ATGCGGCGAG CCGGGCGGCA
GCCGTGAGCC TGCTGATATC GCTCGACTAC GTTCGGCCGG AGGGCAAGGC GAAGCCGGTC
GCGCAGCGCA TGGGCGCGCG CGCGGCCTGG GTCGCGGCCG CATTCGGGTT GCCGTGGCTG
TTGTGGCCGG ACTGGCGCGC GGGCGTTGCG GCCTTCGTCG CGCTCGTGCT CGTGCGGGCA
TGGGCGGCCC GCTATTTCGT GAAGCGGATC GGCGGTTATA CCGGCGACTG TCTCGGCTTC
GCGCAGCAAC TGGGTGAACT CGCGATCTAT CTGGTGGTGC TCGGATGGAT CTCGTCCTGA
|
|---|
| Protein sequence | MTPERARGGV RAELRYFFVA LGYFTRVPVP RAIGYAAGDL DQAARYFPLI GACVGAWGAL
VYLAALRVLP ASIAVGLSMA ATLLATGAFH EDGLADSCDA FGGGYTREDV LRIMHDSRIG
TFGAAALVIT LGLKWQALAA MPPLRAAWTM VAAHAASRAA AVSLLISLDY VRPEGKAKPV
AQRMGARAAW VAAAFGLPWL LWPDWRAGVA AFVALVLVRA WAARYFVKRI GGYTGDCLGF
AQQLGELAIY LVVLGWISS
|
|---|
| |