Gene BamMC406_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2338 
Symbol 
ID6178173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2603857 
End bp2604852 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID641682112 
Productspore coat U domain-containing protein 
Protein accessionYP_001809032 
Protein GI172061380 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.156142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG ACGAATTCGA CACGGCGCGA CGCTGGATCC GCGCGCTAGC GTGCGTGCTG 
CTGGCCGCGC TGCTCGGCAT GCCGTGGATG CCGGCCCGGG CGGACACGTG TTCGGTGACG
CCGCCGGCGC CGAGCTTCGG CTCGGTCAGT CCGATCACGC TGCAGGCTTA TACGACGAAC
AGCACGATGA CGGTCAGTTG CACGTGGGAT GCACTGAGTC TGAACACCGG CGTGCTCGTT
TGCGTGAACC TCGGCGGCAC GAGCCCGCGC TACCTGACCA ACGGGACGAA CCAGATGCAG
TACGACCTGT ATCAGGACGC CGGCTATTCG CAGCCCTGGG GCGCCGTCAG TGCCGGCACG
ACGCCGATCT CCGTGTCGTT GACGAAACCT GCGCTCGGCA CGACCGCGAG TACCAACGTG
ACCATCTATG GCCGCATCGC GTCGAACCAG CCGACCGTGC CGACCGTGAA CAATGCCAGC
ACCGTCTATA CGCAAAGTTT CGCCGGCAAC CAGGCCGCCT ACAGCTTCAG TTTTTCGCTG
CTCGGCGTGC AGCCAACGCC GTGCGTGTCG CAGTCGACGG CCGGCACGAT GAGCTTTGCC
GCTACCGCCA CCGTCGTCAA CAACTGCATC ATCAGCGCGA CCGGCGTGGC GTTTCCGGCG
GCGGGCGTGC TGACGTCGGC GCTGAGCGCG AGCGGCTCGA TCAGTGCGCG CTGCACGAAC
GGCGATGCAT TCCAGATTGC GTTGAACGGC GGGGTCAGCG GCAGTGTCGT CGCACGCACG
ATGCAGCGCA CGGGCGGCGG CTCGGTCAGC TATCAGCTCT ATCAGGACAG CGGCCACACG
CAGCCGTGGG GCGACGGCAC CGGCGGCACG TCGATGGCGA CCGGCACCGG CAGCGGGTTC
GCGCAGGCGA TCACCGTGTA CGGCAGCGTC CCCGCGCAGG CGACGCCGGC GCCCGGCAAC
TACAGCGACA CCATTACCGC GACGATCAGC TTCTGA
 
Protein sequence
MADDEFDTAR RWIRALACVL LAALLGMPWM PARADTCSVT PPAPSFGSVS PITLQAYTTN 
STMTVSCTWD ALSLNTGVLV CVNLGGTSPR YLTNGTNQMQ YDLYQDAGYS QPWGAVSAGT
TPISVSLTKP ALGTTASTNV TIYGRIASNQ PTVPTVNNAS TVYTQSFAGN QAAYSFSFSL
LGVQPTPCVS QSTAGTMSFA ATATVVNNCI ISATGVAFPA AGVLTSALSA SGSISARCTN
GDAFQIALNG GVSGSVVART MQRTGGGSVS YQLYQDSGHT QPWGDGTGGT SMATGTGSGF
AQAITVYGSV PAQATPAPGN YSDTITATIS F