Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2338 |
Symbol | |
ID | 6178173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2603857 |
End bp | 2604852 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641682112 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001809032 |
Protein GI | 172061380 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.156142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATG ACGAATTCGA CACGGCGCGA CGCTGGATCC GCGCGCTAGC GTGCGTGCTG CTGGCCGCGC TGCTCGGCAT GCCGTGGATG CCGGCCCGGG CGGACACGTG TTCGGTGACG CCGCCGGCGC CGAGCTTCGG CTCGGTCAGT CCGATCACGC TGCAGGCTTA TACGACGAAC AGCACGATGA CGGTCAGTTG CACGTGGGAT GCACTGAGTC TGAACACCGG CGTGCTCGTT TGCGTGAACC TCGGCGGCAC GAGCCCGCGC TACCTGACCA ACGGGACGAA CCAGATGCAG TACGACCTGT ATCAGGACGC CGGCTATTCG CAGCCCTGGG GCGCCGTCAG TGCCGGCACG ACGCCGATCT CCGTGTCGTT GACGAAACCT GCGCTCGGCA CGACCGCGAG TACCAACGTG ACCATCTATG GCCGCATCGC GTCGAACCAG CCGACCGTGC CGACCGTGAA CAATGCCAGC ACCGTCTATA CGCAAAGTTT CGCCGGCAAC CAGGCCGCCT ACAGCTTCAG TTTTTCGCTG CTCGGCGTGC AGCCAACGCC GTGCGTGTCG CAGTCGACGG CCGGCACGAT GAGCTTTGCC GCTACCGCCA CCGTCGTCAA CAACTGCATC ATCAGCGCGA CCGGCGTGGC GTTTCCGGCG GCGGGCGTGC TGACGTCGGC GCTGAGCGCG AGCGGCTCGA TCAGTGCGCG CTGCACGAAC GGCGATGCAT TCCAGATTGC GTTGAACGGC GGGGTCAGCG GCAGTGTCGT CGCACGCACG ATGCAGCGCA CGGGCGGCGG CTCGGTCAGC TATCAGCTCT ATCAGGACAG CGGCCACACG CAGCCGTGGG GCGACGGCAC CGGCGGCACG TCGATGGCGA CCGGCACCGG CAGCGGGTTC GCGCAGGCGA TCACCGTGTA CGGCAGCGTC CCCGCGCAGG CGACGCCGGC GCCCGGCAAC TACAGCGACA CCATTACCGC GACGATCAGC TTCTGA
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Protein sequence | MADDEFDTAR RWIRALACVL LAALLGMPWM PARADTCSVT PPAPSFGSVS PITLQAYTTN STMTVSCTWD ALSLNTGVLV CVNLGGTSPR YLTNGTNQMQ YDLYQDAGYS QPWGAVSAGT TPISVSLTKP ALGTTASTNV TIYGRIASNQ PTVPTVNNAS TVYTQSFAGN QAAYSFSFSL LGVQPTPCVS QSTAGTMSFA ATATVVNNCI ISATGVAFPA AGVLTSALSA SGSISARCTN GDAFQIALNG GVSGSVVART MQRTGGGSVS YQLYQDSGHT QPWGDGTGGT SMATGTGSGF AQAITVYGSV PAQATPAPGN YSDTITATIS F
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