| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2266 |
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| Symbol | |
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| ID | 6176444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2523149 |
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| End bp | 2524615 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682039 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001808961 |
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| Protein GI | 172061309 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCACCG TCCCTCTCGC CCAGATTCCC GCGCCGCACG ATACGGCCAC GCTCACGCTC
GTCGACCAGC TTGTCCAGTG GGCGCGGCGG CGCATCGACG AGCGCGTGTT CCGGCCCGGC
ATGCGCATGC CGTCGATCCG CAAGCTCGCG CTCGACAAGA GCGTGTCGCG TTTCACCGTC
GTCGAGGCGT ACGAGCGGCT CGTTGCGCAG GGGTATCTCG ATTCGCGGCG CGGCTCCGGT
TTCTACGTGC GCGAGCGCAC GGCCGTCGGT CCGCAGCCGG TCGACAACGT GGCGCGCGTG
GCGGAGGCCG CGCCCGTGCA CAACACGATC GACGTCGTCT GGCTGCTGCG CAACATGCTG
CATACCGCCA GCCCGGAAAA GGGGCCGGGT CTCGGCTACC TGCCGGGCCG CTGGCTCGAC
GGCGAGTTGA TCACCGGCTC GCTGCGCGCG CTCGGGCGCC AGTCCGGCGC GCAGATGCTC
GGCTTCGGCA CGCCGCAGGG CTTTTTGCCG CTGCGCCAGC AACTGCAGAC GCGGCTCGCG
GAAGTCGAGA TCGGCGCGAA GCCCGAGCAA CTCGTGATGG TGTCGGGCAT CACGCAAGCG
ATCGACCTGA TCTCGCGCAT CTACGTGCAG CCGGGCGACG CGGTGATCGT CGGCGATCCC
GCATGGTTCC AGATGTTCGG CCGCTTCGCG TCACAGGGCG CGCAGCTCGT CGGCATGCCG
TATACGCCGG ACGGTCCCGA TCTCGACGCG CTGGAAACGC TCGTGCAGAT GTGGCGGCCG
AAGATGCTCG TGATCAATTC GGTGCTGCAG AACCCGACCG GCACGTCGCT GTCGGCCGCG
CAGGCGTTCC GGATCCTGAA GCTCGCGGAG GCATACGACT TTCTCGTCGT CGAGGATGAT
GTGTACGGCG ACCTGTGCCC GCCGAGCTAC CCGGCGACGC GGCTCGCGAG CCTCGACCAG
CTGAAGCGCG TGATCTACCT CGGCAGCTAT TCGAAGACGC TCGCGGCGAA CTTGCGGGTC
GGCTATGTCG CCTGCGCGCC GGAGATCGCG AAGGCGATCA CCGACCAGAA GATGCTGGTC
GGGATGACGA CGCCGGAGCT CAACGAGCGC GTGCTCTACA AGATCCTGAC CGAAGGGCAT
TACCGGCGCC ACGTCGAGCG CCTGCGCGCG CGGCTCGACG GCGTGCGCGA CAAGACCGCG
CGGATGCTCG AGCGCACCGG GCTGCGGCTG TTCGCGATGC CGGCGGCCGG GATGTTCCTG
TGGGCCGACA CGGGCGTCGA TTCGGACGCG CTCGCGGCCG CCGCGCACGA AGAAGGCTTC
CTGCTGACGC CGGGGAGCCT GTTCTCGCCG CAGCAGTCGC CGTCGACGTG GACGCGCTTC
AACGTCGCGA ACTGCGGCGA TCCGGCGCTG GCGCCATTTC TCGGCGAGTA TCTGGGGGCG
GTGTCGAGGC GGGGAGCAGG GGGATGA
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| Protein sequence | MSTVPLAQIP APHDTATLTL VDQLVQWARR RIDERVFRPG MRMPSIRKLA LDKSVSRFTV
VEAYERLVAQ GYLDSRRGSG FYVRERTAVG PQPVDNVARV AEAAPVHNTI DVVWLLRNML
HTASPEKGPG LGYLPGRWLD GELITGSLRA LGRQSGAQML GFGTPQGFLP LRQQLQTRLA
EVEIGAKPEQ LVMVSGITQA IDLISRIYVQ PGDAVIVGDP AWFQMFGRFA SQGAQLVGMP
YTPDGPDLDA LETLVQMWRP KMLVINSVLQ NPTGTSLSAA QAFRILKLAE AYDFLVVEDD
VYGDLCPPSY PATRLASLDQ LKRVIYLGSY SKTLAANLRV GYVACAPEIA KAITDQKMLV
GMTTPELNER VLYKILTEGH YRRHVERLRA RLDGVRDKTA RMLERTGLRL FAMPAAGMFL
WADTGVDSDA LAAAAHEEGF LLTPGSLFSP QQSPSTWTRF NVANCGDPAL APFLGEYLGA
VSRRGAGG
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