Gene BamMC406_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2252 
Symbol 
ID6176879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2511139 
End bp2512314 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content65% 
IMG OID641682025 
Producthypothetical protein 
Protein accessionYP_001808947 
Protein GI172061295 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.523205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCA ATTTCTTCTA CGCGCTGCGC GCAGCCAAGC TGCCCGTCTC GGTGAAGGAA 
TACCTGACGC TGCTCGAATC GCTGAAGGCC GGGCTGATCT CGCCGTCGAT CGACGCGTTC
TACTTCCTCG CGCGCATGAC GCTCGTCAAG GACGAGCAGT ACTTCGACAA GTTCGACCAG
GCGTTCGGCG CGTATTTCCA TGGTGTATCC GCATTGCCGT CCGACGCGTT CGACCTGCCG
CTCGACTGGC TCGAGAAGCG CCTCGAACGC GAGCTGTCGC CGGAGGAAAA GGCGCAGATC
GACGCAATGG GCGGGCTCGA CAAGCTGATG GAACGCCTGA AGGAGCTGCT CGACGAGCAG
AAGGAACGCC ACGAAGGCGG CAACAAGTGG ATCGGCACGG GCGGCACGTC GCCGTTCGGG
CACGGCGGCT ACAACCCCGA GGGCATGCGC ATCGGCGGCC CGTCGAACGG CAACCGCACG
GCGGTCAAGG TGTGGGAGGC GCGCGCGTAC CGCGACTACG ACGATTCGGT CGAGATCGGC
ACGCGCAACA TCAAGATCGC GCTGCGGCGC CTGCGCCGCT TCGCACGCGA AGGCGCGGCC
GAGGAGCTCG ACCTGCCCGG CACGATCCGC AGCACGGCCG CGAATGCCGG CTGGCTCGAC
CTGCGGATGG TGCCCGAGCG CCACAACAAC GTGAAGGTGC TGATGCTGCT CGACGTCGGC
GGCTCGATGG ACGACCACAT CAAGCGCACC GAGGAGCTGT TCTCCGCCGC GAAGGCCGAG
TTCAAGCACC TGGAGTTCTA CTACTTCCAC AACTGCGTGT ACGACCACCT GTGGAAGAAC
AACCGCCGCC GTCATTCGGA GCGCACCGCG ACGTGGGACG TGCTGCACAA GTTCACGCCC
GACTACAAGC TGATCTTCGT CGGCGACGCG ACGATGAGCC CGTACGAAGT GCTGCAGCCC
GGCGGCTCGG TCGAATACAA CAACCCGGAA GCCGGCGCCG TCTGGCTGCG CCGCCTCGCC
GACCAGTTCC CCCACCATGC ATGGCTGAAC CCCGAGCCCG AGCGGCTATG GGAATACCGG
CAATCGGTCG CGATGATCCG CGACCTGCTC GGCCAGCGCA TGTATCCGCT CACGCTCGCG
GGCCTCGAAA CCGCGATGCG TGCGCTCAGC AAGTAA
 
Protein sequence
MLLNFFYALR AAKLPVSVKE YLTLLESLKA GLISPSIDAF YFLARMTLVK DEQYFDKFDQ 
AFGAYFHGVS ALPSDAFDLP LDWLEKRLER ELSPEEKAQI DAMGGLDKLM ERLKELLDEQ
KERHEGGNKW IGTGGTSPFG HGGYNPEGMR IGGPSNGNRT AVKVWEARAY RDYDDSVEIG
TRNIKIALRR LRRFAREGAA EELDLPGTIR STAANAGWLD LRMVPERHNN VKVLMLLDVG
GSMDDHIKRT EELFSAAKAE FKHLEFYYFH NCVYDHLWKN NRRRHSERTA TWDVLHKFTP
DYKLIFVGDA TMSPYEVLQP GGSVEYNNPE AGAVWLRRLA DQFPHHAWLN PEPERLWEYR
QSVAMIRDLL GQRMYPLTLA GLETAMRALS K