Gene BamMC406_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2246 
Symbol 
ID6177065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp2506840 
End bp2507484 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID641682019 
Productendonuclease III 
Protein accessionYP_001808941 
Protein GI172061289 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.769441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA CCAAACGACG CGCGATCTAC GAAACGCTGC AAAGCCTCAA TCCGCATCCG 
ACCACCGAGC TCGAATACAC GACGCCGTTC GAGTTGCTGA TCGCGGTGAT GCTGTCCGCG 
CAGGCGACCG ACGTGTCGGT CAACAAGGCG ATGCGCAAGA TGTTTCCGGT CGCGAACACC 
CCGCGACAAA TCGTCGCGCT CGGTGAAGAA GGCGTCGCCG ACTACATCAA GACGATCGGC 
CTGTACCGCA CCAAGGCGAA GAACGTGGTC GCCGCGTGCA AGATCCTGCT CGAGCGCTAC 
GACGGCGAGG TGCCGGCCGA TCGCGAAGCG CTCGAGAGCC TGCCGGGCGT CGGCCGCAAG 
ACCGCGAACG TCGTCCTGAA CACCGCGTTC GGCCAGCCGA CGATCGCGGT CGACACGCAT 
ATCTTCCGCG TCGCGAACCG CACGGGGCTT GCGCCCGGCA AGGACGTGCG GGCCGTCGAG 
GCCGCGCTCG AGAAGTTCAC GCCGAAGGAA TTCCTGCAGG ATGCGCATCA CTGGCTGATC 
CTGCACGGGC GCTACGTGTG CAAGGCCCGC AAGCCCGAAT GCTGGCACTG CGCGATCGAG 
CCGCTGTGCG AATTCCGGCC GAAGACGCCG CCGCCGAACG ACTGA
 
Protein sequence
MNATKRRAIY ETLQSLNPHP TTELEYTTPF ELLIAVMLSA QATDVSVNKA MRKMFPVANT 
PRQIVALGEE GVADYIKTIG LYRTKAKNVV AACKILLERY DGEVPADREA LESLPGVGRK 
TANVVLNTAF GQPTIAVDTH IFRVANRTGL APGKDVRAVE AALEKFTPKE FLQDAHHWLI 
LHGRYVCKAR KPECWHCAIE PLCEFRPKTP PPND