Gene BamMC406_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2242 
Symbol 
ID6177962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2501404 
End bp2503233 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content68% 
IMG OID641682015 
Productglycoside hydrolase 15-related 
Protein accessionYP_001808937 
Protein GI172061285 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.55211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCT TGATCGAAGA CTACGCCCTC GTCGGCGACG GACACACCGC CGCGCTGATT 
TCGAAAGACG GCTCCGTCGA CTGGCTGTGC TGGCCCCGCT TCGATTCGGG CGCCTGCTTC
GCGGCGCTGG TCGGCACCCC CGAGCACGGC CGCTGGCTGC TCGCGCCCGC CGCCGATGCC
GCGATCACGC ACACGTCACG CCGCTACCGC GGCGACACGC TGATTCTCGA AACCGACTAC
GAAAGCGCCG ACGGCGCCGT CACCGTGATC GACTTCATGC CGCCCGGCAA CGGCTGGTCG
GAACTCGTGC GGATCGTCGT CGGCCGGCAC GGCACGATGA AGATGCGCAT GGAGCTGGTG
TTGCGCTTCG ACTACGGTTT CTCGATCCCG TGGGTCACGC AGCTGTCACG CGAGAACGGG
ATGAAAGCAA TCGCCGGACC CGATACGGTC GTGCTGCGCA CGCCGGTCGA GCTCACCGGC
AAGAACCTGC ACACGCTCGC CGAATTCACG GTGAGCGCCG ACGAGCGCAT CCCGTTCTCG
CTCGGCTACG CGGCGTCCCA CCTGCGTCTG CCGCCCGCGC GGGACCCGCT GTCGATGCTC
GCGCGCACCG AGAACTACTG GCTCGAATGG TCGGGGCGCT GCCAGGTGCA GGGCCGCTAC
GCGGCCGCCG TGCGCCGCTC GCTGATCACG CTGAAGGCAC TCGCGTACGA ACCGACCGGC
GGCATCGTCG CGGCGCCCAC CACGTCGCTG CCCGAGAAGA TCGGCGGCAA CCGCAACTGG
GACTATCGCT ACTGCTGGCT GCGCGACGCG ACGATCACGC TGCTCGCGCT GATGCGCGGC
GGCTACTACG ACGAGGCGCG CGCGTGGCGC ACGTGGCTCG GCCGCGTGAT GGCCGGCTCG
CCCGAGCAGA TCCAGATCAT GTACGGGATC GCCGGCGAGC GCCGGCTGCC GGAAATGGAG
CTCGACTGGC TGCCCGGCTA TCAGGATTCG AAACCGGTGC GCATCGGCAA CGGCGCCGCG
AACCAGCTGC AGCTCGACGT GTTCGGCGAG GTGATGGCCG CGCTGCACCT CGCGCGCGTG
GGCGGCCTGC AGGCCGACGA CACGGTCTGG TCCGTGCAAT GCGCGCTGCT CGACCATCTC
GAGAAGATCT GGGAGGAGCC GGATGAAGGC ATCTGGGAAA CGCGCGGCGG ACGCCGCCAT
TTCACGTTCT CGAAGGTGAT GGCGTGGGTC GCGTTCGACC GCGCGATCAA GTCGGCGGAG
ATGTTCCGGC TGCCCGGCTC GCTCGATCGC TGGCGCGCGC TGCGCGACCG GATCCACGCT
GATGTATGCG ACAACGCATG GCATGAAGGC AAACAGTCGT TTGCACAAAG CTACGGCAGC
GACGAGCTCG ACGCGAGCGT GCTGCTGATG CCGCTGCTCG GCTTCTTGCC GCCGGAAGAC
CCGCGCATCG TCGGCACCGT CGACGCGATC GAGCGGGAAT TGCTGCACGA CGGGCTCGTG
ATGCGCTACC GCACGACCGA ATACGACGAC GGCCTGCCGC CCGGCGAAGG CACGTTTCTC
GCGTGCAGCT TCTGGCTGGT CGACAATTAC GCGCTGCTCG GCCGGATCGA CGACGCGCAC
CGGCTGTTCA GCCGGCTGCT CGCGCTGTCC AACGACCTCG GGCTGCTTGC CGAGGAATAC
GATCCGGTCG AAGGCCGGCT CGTCGGCAAT TTCCCGCAAG CGTTTTCGCA CGTCGCGCTG
GTGCATACCG CGATGAACCT CATGCACCAC GAAGAGGCAA TGGCGCGCGC GGCAGGCCAG
CCCGCCCCGG CCGTCGCGAC GGGGCGCTGA
 
Protein sequence
MPALIEDYAL VGDGHTAALI SKDGSVDWLC WPRFDSGACF AALVGTPEHG RWLLAPAADA 
AITHTSRRYR GDTLILETDY ESADGAVTVI DFMPPGNGWS ELVRIVVGRH GTMKMRMELV
LRFDYGFSIP WVTQLSRENG MKAIAGPDTV VLRTPVELTG KNLHTLAEFT VSADERIPFS
LGYAASHLRL PPARDPLSML ARTENYWLEW SGRCQVQGRY AAAVRRSLIT LKALAYEPTG
GIVAAPTTSL PEKIGGNRNW DYRYCWLRDA TITLLALMRG GYYDEARAWR TWLGRVMAGS
PEQIQIMYGI AGERRLPEME LDWLPGYQDS KPVRIGNGAA NQLQLDVFGE VMAALHLARV
GGLQADDTVW SVQCALLDHL EKIWEEPDEG IWETRGGRRH FTFSKVMAWV AFDRAIKSAE
MFRLPGSLDR WRALRDRIHA DVCDNAWHEG KQSFAQSYGS DELDASVLLM PLLGFLPPED
PRIVGTVDAI ERELLHDGLV MRYRTTEYDD GLPPGEGTFL ACSFWLVDNY ALLGRIDDAH
RLFSRLLALS NDLGLLAEEY DPVEGRLVGN FPQAFSHVAL VHTAMNLMHH EEAMARAAGQ
PAPAVATGR