Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2242 |
Symbol | |
ID | 6177962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2501404 |
End bp | 2503233 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682015 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_001808937 |
Protein GI | 172061285 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.55211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCT TGATCGAAGA CTACGCCCTC GTCGGCGACG GACACACCGC CGCGCTGATT TCGAAAGACG GCTCCGTCGA CTGGCTGTGC TGGCCCCGCT TCGATTCGGG CGCCTGCTTC GCGGCGCTGG TCGGCACCCC CGAGCACGGC CGCTGGCTGC TCGCGCCCGC CGCCGATGCC GCGATCACGC ACACGTCACG CCGCTACCGC GGCGACACGC TGATTCTCGA AACCGACTAC GAAAGCGCCG ACGGCGCCGT CACCGTGATC GACTTCATGC CGCCCGGCAA CGGCTGGTCG GAACTCGTGC GGATCGTCGT CGGCCGGCAC GGCACGATGA AGATGCGCAT GGAGCTGGTG TTGCGCTTCG ACTACGGTTT CTCGATCCCG TGGGTCACGC AGCTGTCACG CGAGAACGGG ATGAAAGCAA TCGCCGGACC CGATACGGTC GTGCTGCGCA CGCCGGTCGA GCTCACCGGC AAGAACCTGC ACACGCTCGC CGAATTCACG GTGAGCGCCG ACGAGCGCAT CCCGTTCTCG CTCGGCTACG CGGCGTCCCA CCTGCGTCTG CCGCCCGCGC GGGACCCGCT GTCGATGCTC GCGCGCACCG AGAACTACTG GCTCGAATGG TCGGGGCGCT GCCAGGTGCA GGGCCGCTAC GCGGCCGCCG TGCGCCGCTC GCTGATCACG CTGAAGGCAC TCGCGTACGA ACCGACCGGC GGCATCGTCG CGGCGCCCAC CACGTCGCTG CCCGAGAAGA TCGGCGGCAA CCGCAACTGG GACTATCGCT ACTGCTGGCT GCGCGACGCG ACGATCACGC TGCTCGCGCT GATGCGCGGC GGCTACTACG ACGAGGCGCG CGCGTGGCGC ACGTGGCTCG GCCGCGTGAT GGCCGGCTCG CCCGAGCAGA TCCAGATCAT GTACGGGATC GCCGGCGAGC GCCGGCTGCC GGAAATGGAG CTCGACTGGC TGCCCGGCTA TCAGGATTCG AAACCGGTGC GCATCGGCAA CGGCGCCGCG AACCAGCTGC AGCTCGACGT GTTCGGCGAG GTGATGGCCG CGCTGCACCT CGCGCGCGTG GGCGGCCTGC AGGCCGACGA CACGGTCTGG TCCGTGCAAT GCGCGCTGCT CGACCATCTC GAGAAGATCT GGGAGGAGCC GGATGAAGGC ATCTGGGAAA CGCGCGGCGG ACGCCGCCAT TTCACGTTCT CGAAGGTGAT GGCGTGGGTC GCGTTCGACC GCGCGATCAA GTCGGCGGAG ATGTTCCGGC TGCCCGGCTC GCTCGATCGC TGGCGCGCGC TGCGCGACCG GATCCACGCT GATGTATGCG ACAACGCATG GCATGAAGGC AAACAGTCGT TTGCACAAAG CTACGGCAGC GACGAGCTCG ACGCGAGCGT GCTGCTGATG CCGCTGCTCG GCTTCTTGCC GCCGGAAGAC CCGCGCATCG TCGGCACCGT CGACGCGATC GAGCGGGAAT TGCTGCACGA CGGGCTCGTG ATGCGCTACC GCACGACCGA ATACGACGAC GGCCTGCCGC CCGGCGAAGG CACGTTTCTC GCGTGCAGCT TCTGGCTGGT CGACAATTAC GCGCTGCTCG GCCGGATCGA CGACGCGCAC CGGCTGTTCA GCCGGCTGCT CGCGCTGTCC AACGACCTCG GGCTGCTTGC CGAGGAATAC GATCCGGTCG AAGGCCGGCT CGTCGGCAAT TTCCCGCAAG CGTTTTCGCA CGTCGCGCTG GTGCATACCG CGATGAACCT CATGCACCAC GAAGAGGCAA TGGCGCGCGC GGCAGGCCAG CCCGCCCCGG CCGTCGCGAC GGGGCGCTGA
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Protein sequence | MPALIEDYAL VGDGHTAALI SKDGSVDWLC WPRFDSGACF AALVGTPEHG RWLLAPAADA AITHTSRRYR GDTLILETDY ESADGAVTVI DFMPPGNGWS ELVRIVVGRH GTMKMRMELV LRFDYGFSIP WVTQLSRENG MKAIAGPDTV VLRTPVELTG KNLHTLAEFT VSADERIPFS LGYAASHLRL PPARDPLSML ARTENYWLEW SGRCQVQGRY AAAVRRSLIT LKALAYEPTG GIVAAPTTSL PEKIGGNRNW DYRYCWLRDA TITLLALMRG GYYDEARAWR TWLGRVMAGS PEQIQIMYGI AGERRLPEME LDWLPGYQDS KPVRIGNGAA NQLQLDVFGE VMAALHLARV GGLQADDTVW SVQCALLDHL EKIWEEPDEG IWETRGGRRH FTFSKVMAWV AFDRAIKSAE MFRLPGSLDR WRALRDRIHA DVCDNAWHEG KQSFAQSYGS DELDASVLLM PLLGFLPPED PRIVGTVDAI ERELLHDGLV MRYRTTEYDD GLPPGEGTFL ACSFWLVDNY ALLGRIDDAH RLFSRLLALS NDLGLLAEEY DPVEGRLVGN FPQAFSHVAL VHTAMNLMHH EEAMARAAGQ PAPAVATGR
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