Gene BamMC406_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2206 
Symbol 
ID6177834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2459235 
End bp2460209 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content69% 
IMG OID641681979 
Productalcohol dehydrogenase 
Protein accessionYP_001808901 
Protein GI172061249 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.889298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.771237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAG CAATCCGATA CGACCAGCCC GGCGGCCCGG ACGTGATGAA GTGGGTCGAT 
GTCGAGGTCG GCGCGCCGAA GGCGGGCGAA GTCCGCATCC GGCAGCAGGC GGTCGGGCTC
AATTACATCG ACGTGTATTT CCGCACGGGC CTCTATCCGC AGCCGCTGCC CGGCGGTCTC
GGGATGGAGG CGGCGGGCGA GGTGACGGCC GTCGGCGACG GCGTGACCGC CTTCAAGGCG
GGCGACCGCG TCGCATACGT CGGGCAGCCG CCGGGCGCGT ATGCGCAGGA GCGCGTGATG
CCGGCGGAGC GGCTCGTGAA GCTGCCGGAC GGCATCAGCG ATGACGACGC GGCCTCGGTG
ATGCTGCAGG GGCTGACCGC GCACTACCTG CTGCGCCGCA CATACCCGGT GAAGGCCGGC
GACACGATCC TGATCCATGC GGCGGCCGGC GGCGTCGGCC TGCTCGTGTG CCAGTGGGCG
AAGGCGCTCG GCGCGACCGT GATCGGGACG GTCGGCTCCG ACGAGAAGGC CGCGCTCGCG
AAGGCGCACG GCTGCGATCA TCCGATCGTC TACACGCGCG AGAACTTCAC GCAGCGCGTG
AAGGAGATCA CGAACGGCGC GGGCGTGCCG GTCGTCTACG ATTCGATCGG CAAGGACACC
TACATCGGTT CGCTCGACTG CCTCGCGCCG CTCGGCTACT TCGTCAGCTT CGGCAATGCA
TCCGGCCCGC TGCCGGCGAT CGACTCGAAG GAGTTCTCGT CGCGCGGCTC GCTGTTCTTC
ACGCGGCCGA CGCTGTTCTC GTACATCGCG AAGCGCGCCG ATCTCGAAGC CGCGGCCGCC
GAGCTGTTCG ACGTGATCCT GACGGGCAAG GTGAAGACGA GCATCAACCA GCGCTATCCG
CTCGCGGAAG TCGGCCGCGC GCATGCCGAC CTCGAGTCGC GCAAGACGAC CGGCTCGACG
ATCCTCATTC CCTGA
 
Protein sequence
MPKAIRYDQP GGPDVMKWVD VEVGAPKAGE VRIRQQAVGL NYIDVYFRTG LYPQPLPGGL 
GMEAAGEVTA VGDGVTAFKA GDRVAYVGQP PGAYAQERVM PAERLVKLPD GISDDDAASV
MLQGLTAHYL LRRTYPVKAG DTILIHAAAG GVGLLVCQWA KALGATVIGT VGSDEKAALA
KAHGCDHPIV YTRENFTQRV KEITNGAGVP VVYDSIGKDT YIGSLDCLAP LGYFVSFGNA
SGPLPAIDSK EFSSRGSLFF TRPTLFSYIA KRADLEAAAA ELFDVILTGK VKTSINQRYP
LAEVGRAHAD LESRKTTGST ILIP