Gene BamMC406_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2203 
Symbol 
ID6177793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2454865 
End bp2456949 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content69% 
IMG OID641681976 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_001808898 
Protein GI172061246 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.574027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.929448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATC CGGCGCTGCT GCGTCCGGCG ATCGTGGACT CGTTCAAGAA ACTCACGCCG 
CGCACGCAGT TCCGCAACCC GGTGATGTTC TGCGTGTACG TCGGCAGCAT CCTGACCACG
ATTCTGTGGA TCGCGGCCCT CGCCGGCCAG GCCGAGGCGC CCGCCGGCTT CATCCTCGCG
ATCGCGCTGT GGCTGTGGTT CACCGTGCTG TTCGCGAACT TCGCCGAAGC GCTCGCCGAA
GGGCGGTCGA AGGCGCAGGC CGCGTCGCTG CGCAGCGCGA AGAAGGATGT GCTGGCGAAG
AAGCTGAACG AGCCGCATCC GAAGTCGCCG ATCCGCATCA CGACCGCGTC CGACCTGCGC
CGCGGCGACG TCGTGCTGGT CGAGGCCGCC GACGTGATCC CGGCCGACGG CGAGGTGATC
GACGGCGTCG CGTCGGTCGA CGAATCGGCG ATCACCGGCG AATCCGCACC GGTGATCCGC
GAGTCGGGCG GCGACTTCTC GTCGGTGACG GGCGGCACGC GCGTGCTGTC CGACTGGATC
GTCGTGAAAG TCACCGCGAA CCCGGGCGAG GCGTTCCTCG ACCGGATGAT CGCGATGGTC
GAAGGCGCGA AGCGCAAGAA GACGCCGAAC GAGGTCGCGC TGACGATCCT GCTCGTCGCG
CTGACGATCG TGATGCTGCT CGCGACCGCG ACGCTGCTGC CGTTCTCGAT GTTCTCGGTC
GAAGCGATGA AGGCCGGTCA CGTGGTGACG ATCACCGCGC TCGTCGCGCT GCTGGTGTGC
CTGATTCCGA CGACGATCGG CGGCCTGCTG TCCGCGATCG GCGTGGCGGG GATGAGCCGG
ATGATGCAGG CGAACGTGAT CGCGACGTCG GGCCGCGCGG TGGAAGCGGC CGGCGACGTC
GACGTGCTGC TGCTCGACAA GACCGGCACG ATTACCCTCG GCAACCGCCA GGCGTCGATG
TTCGTGCCCG CGCCGGGCGT GACCGAGGAA GCGCTGGCCG ACGCCGCGCA GCTGTCGTCG
CTCGCCGACG AAACGCCGGA AGGGCGCAGC ATCGTCGTGC TGGCCAAGGA GCGCTTCAAC
ATCCGTCAGC GCGACATGGC GCAACTGCAC GCGACGTTCC TCGGCTTTTC CGCGCAGACG
CGCATGAGCG GCGTCGATCT GTTCCCCGAG GGGACCCCCG CCGGCGCGCC CGGTCGCGAG
ATCCGCAAGG GCGCGGCCGA CGCGATTCGC CGCTACGTCG AGACACACGG CGGCCGCTTC
CCGGAAGAAG TGCGCCGCGC GGTCGACGAC GTCGCGCGCC GCGGCAGCAC GCCGCTCGTC
GTGGCCGACC TGCATGACGG CGTGGCGCGC GTGCTCGGCG TGATCGAGCT GAAGGACATC
GTGAAGGGCG GCATCAAGGA GCGCTTCGCG GAACTGCGCA AGATGGGCAT CAAGACCGTG
ATGGTGACGG GCGACAACCG GTTGACCGCC GCGGCGATCG CGGCGGAGGC GGGCGTCGAC
GATTTCCTCG CGGAAGCGAC GCCGGAAACC AAGCTCGCGA CGATCCGCGA GCACCAGACG
GCCGGCCGGC TCGTCGCGAT GACGGGCGAC GGCACCAACG ACGCGCCGGC GCTCGCGCAG
GCCGACGTGG CCGTGGCGAT GAACACCGGC ACGCAGGCGG CGAAGGAAGC CGGCAACATG
GTCGACCTCG ATTCGAACCC GACGAAGCTG ATCGAGATCG TCGAGATCGG CAAGCAGATG
CTGATGACGC GCGGCTCGCT GACGACCTTC TCGATCGCGA ACGACATCGC GAAGTACTTC
GCGATCATCC CGGCCGCGTT CGTGACGACG TACCCGCAGC TGCGCGTGCT CGACATCATG
CACTTGAGCT CGCCGGCATC CGCGATCCTG TCGGCGGTGA TCTTCAACGC GCTGATCATC
GTCGCGCTGA TCCCGCTCGC GCTGAAGGGC GTCCCCTACC GGCCGCTCGG CGCCGCGTCG
CTGCTGCGCC GCAACCTGCT GGTGTACGGC CTCGGCGGCC TGCTGCTGCC GTTCCCGTTC
ATCAAGCTGA TCGACATGAC GCTCGCCGCG CTCGGCTGGG CCTGA
 
Protein sequence
MFDPALLRPA IVDSFKKLTP RTQFRNPVMF CVYVGSILTT ILWIAALAGQ AEAPAGFILA 
IALWLWFTVL FANFAEALAE GRSKAQAASL RSAKKDVLAK KLNEPHPKSP IRITTASDLR
RGDVVLVEAA DVIPADGEVI DGVASVDESA ITGESAPVIR ESGGDFSSVT GGTRVLSDWI
VVKVTANPGE AFLDRMIAMV EGAKRKKTPN EVALTILLVA LTIVMLLATA TLLPFSMFSV
EAMKAGHVVT ITALVALLVC LIPTTIGGLL SAIGVAGMSR MMQANVIATS GRAVEAAGDV
DVLLLDKTGT ITLGNRQASM FVPAPGVTEE ALADAAQLSS LADETPEGRS IVVLAKERFN
IRQRDMAQLH ATFLGFSAQT RMSGVDLFPE GTPAGAPGRE IRKGAADAIR RYVETHGGRF
PEEVRRAVDD VARRGSTPLV VADLHDGVAR VLGVIELKDI VKGGIKERFA ELRKMGIKTV
MVTGDNRLTA AAIAAEAGVD DFLAEATPET KLATIREHQT AGRLVAMTGD GTNDAPALAQ
ADVAVAMNTG TQAAKEAGNM VDLDSNPTKL IEIVEIGKQM LMTRGSLTTF SIANDIAKYF
AIIPAAFVTT YPQLRVLDIM HLSSPASAIL SAVIFNALII VALIPLALKG VPYRPLGAAS
LLRRNLLVYG LGGLLLPFPF IKLIDMTLAA LGWA