| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2170 |
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| Symbol | |
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| ID | 6177701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2419843 |
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| End bp | 2421987 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681943 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001808865 |
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| Protein GI | 172061213 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0402548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGT TCAACAAGGT CGTGAAGGAA TTCCAGTGGG GCCAGCACAA GGTGCGCCTC
GAAACCGGTG AAGTCGCCCG CCAGGCGAGC GGTGCCGTGA TCGTCGACGT GGAAGACACC
GTCGTGCTGG CAACCGTCGT CGGCGCGAAG TCGGCGAAGC CGGGCCAGGA TTTCTTCCCG
CTGACCGTCG ACTACCTCGA AAAGACCTAC TCGGCCGGCA AGATCCCGGG CGGCTTCTTC
CGTCGCGAAG GCCGTCCGTC GGAACACGAG ACGCTGACGT CGCGCCTGAT CGACCGTCCG
CTGCGTCCGC TGTTCCCGGA AGGCTTCTAC AACGAAGTGC AGGTCGTGAT CCACGTGCTG
TCCGTGAACC CGGAAATCCC GGCGGACATC CCCGCGCTGA TCGGCGCGTC GGCCGCGCTC
GCCGTGTCGG GCCTGCCGTT CAACGGTCCG GTCGGTGCCG CGCGCGTTGC GTACATCGAC
AACGCATACG TGCTGAACCC GACGCGTGAC CAGCTCAAGG CCTCGAGCCT CGACCTCGTC
GTCGCCGGTA CGGAGCGCGC GGTGCTGATG GTCGAATCGG AAGCCGACCA ACTGCCGGAA
GACGTGATGC TGGGCGCGGT CGTGTTCGGC CACGAGCAGA TGCAGACGGC GATCGACGCT
ATCCACGAAC TCGTGCGCGA AGGCGGCAAG CCCGAGTGGG ACTGGCAGCC GGCACCGAAG
AACGAGGCGC TGATCGCGCG CGTGACGGAG CTGGCGCACG GTGACCTGCT CGCCGCTTAC
CAACTGCGCG ACAAGCAAGC GCGTTCGACG AAGCTGAAGG AAGTCTACGC GGCGACCTCG
GCGAAGCTCG AGGAAGACGC ACAGGCGGCC GGTACGGTCG CGGCCGACAA GGCCACCGTC
GGCAACGTCC TGTTCGACAT CGAAGCGAAG ATCGTCCGTT CGCAGATCCT GAACGGCGAG
CCGCGCATCG ACGGTCGCGA CACGCGCACC GTGCGTCCGA TCGAGATCCG CACCGGCGTG
CTGCCGCGCA CCCACGGTTC GGCGCTGTTC ACGCGTGGCG AAACGCAGGC GCTCGTCGTC
GCGACGCTCG GCACGAAGGG TGACGAGCAG ATCATCGACG CGCTCGAAGG CGAATACCGC
GAGCGCTTCA TGCTCCACTA CAACATGCCC CCGTTCGCGA CCGGCGAAAC GGGCCGCGTC
GGCTCGCCGA AGCGCCGCGA AATCGGCCAC GGCCGTCTCG CGAAGCGCGC GCTGGTCAAG
TGCCTGCCGA GCGCCGACGA ATTCGGCTAC TCGATCCGCG TCGTGTCGGA AATCACCGAG
TCGAACGGCT CGTCGTCGAT GGCGTCGGTG TGCGGCGGCT GCCTCGCGCT GATGGACGCC
GGCGTGCCGA TGAAGGCGCA CGTCGCGGGC ATCGCGATGG GCCTGATCCT CGAAGGCAAC
AAGTTTGCGG TGCTGACCGA CATCCTCGGC GACGAAGATC ACCTCGGCGA CATGGACTTC
AAGGTGGCCG GCACGGAGCA AGGCGTGACG GCGCTGCAGA TGGACATCAA GATCCAGGGC
ATCACGAAGG AAATCATGCA GGTCGCGCTC GCGCAGGCGA AGGAAGGCCG CATGCACATC
CTCGGCAAGA TGACGTCGGC GGTCTCGGGT GCGAACACGC AACTGTCGGA ATTCGCGCCG
CGCATGATCA CGATCAAGAT CAACCCGGAA AAGATCCGCG ACGTGATCGG CAAGGGTGGC
TCGGTGATCC GCGCGCTGAC GGAAGAAACG GGCACGACCA TCGACATCTC GGATGACGGC
GTCGTGACGA TCGCGAGCAC GAGCAGCGAA GGCATGGCCG AAGCGAAGAA GCGTATCGAG
AACATCACGG TCGAGATCGA AGTCGGCCAG GTGTACGAAG GCACGGTGCT CAAGCTGCTC
GATTTCGGCG CGATCGTGAA CCTGCTGCCG GGCAAGGATG GCCTGCTGCA CATCTCGGAA
ATCGTCAACG AGCGCGTGAA GGACATCAAC GACTACCTGA AGGAGGGCCA ACAGGTTAAG
GTCAAGGTGA TCCAGACGGA CGAGAAGGGT CGCGTGCGTC TGTCGGCGAA GGCGCTGCTG
AACGAAGCAG CGGCGTCGCA GTCGGATACG CCGCCGCAGC AGTAA
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| Protein sequence | MSMFNKVVKE FQWGQHKVRL ETGEVARQAS GAVIVDVEDT VVLATVVGAK SAKPGQDFFP
LTVDYLEKTY SAGKIPGGFF RREGRPSEHE TLTSRLIDRP LRPLFPEGFY NEVQVVIHVL
SVNPEIPADI PALIGASAAL AVSGLPFNGP VGAARVAYID NAYVLNPTRD QLKASSLDLV
VAGTERAVLM VESEADQLPE DVMLGAVVFG HEQMQTAIDA IHELVREGGK PEWDWQPAPK
NEALIARVTE LAHGDLLAAY QLRDKQARST KLKEVYAATS AKLEEDAQAA GTVAADKATV
GNVLFDIEAK IVRSQILNGE PRIDGRDTRT VRPIEIRTGV LPRTHGSALF TRGETQALVV
ATLGTKGDEQ IIDALEGEYR ERFMLHYNMP PFATGETGRV GSPKRREIGH GRLAKRALVK
CLPSADEFGY SIRVVSEITE SNGSSSMASV CGGCLALMDA GVPMKAHVAG IAMGLILEGN
KFAVLTDILG DEDHLGDMDF KVAGTEQGVT ALQMDIKIQG ITKEIMQVAL AQAKEGRMHI
LGKMTSAVSG ANTQLSEFAP RMITIKINPE KIRDVIGKGG SVIRALTEET GTTIDISDDG
VVTIASTSSE GMAEAKKRIE NITVEIEVGQ VYEGTVLKLL DFGAIVNLLP GKDGLLHISE
IVNERVKDIN DYLKEGQQVK VKVIQTDEKG RVRLSAKALL NEAAASQSDT PPQQ
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