Gene BamMC406_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2164 
Symbol 
ID6176363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2415468 
End bp2416070 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content63% 
IMG OID641681936 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_001808859 
Protein GI172061207 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.116898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA AAATCGAGAT CCTGAAGGCA AACCTCGAAG CCGCGCTCGG CGCGCGCGTG 
GTGAGCCTCA CCGAAGCGAT CGGTGAACTG ACGCTCGTCG TGAAGGCGAG CGATTACCTC
GAAGTCGCAA AGACGCTGCG CGACGATCCG AAGCTCCGTT TCGAGCAACT GATCGACCTC
TGCGGCGTCG ACTACCAGAC TTACGGCGAC GGTGCGTACG ACGGCCCGCG TTTTGCGGCC
GTGTCGCAAC TGCTGTCGGT CACGAACAAC TGGCGCCTGC GCCTGCGCGT GTTCGCGCCG
GACGACGATC TGCCGATCGT GGCATCGCTC GTCGACATCT GGACCTCCGC AAACTGGTAC
GAGCGCGAGG CGTTCGACCT GTACGGCCTC GTGTTCGAGG GGCACCCCGA CCTGCGCCGC
ATCCTCACCG ACTACGGCTT CATCGGCCAT CCGTTCCGCA AGGACTTCCC GGTGTCGGGC
TATGTCGAAA TGCGTTACGA CCCGGAAGAG AAGCGGGTCG TCTATCAGCC GGTGACGATC
GAGCCGCGCG AAATCACGCC GCGCGTGATC CGCGAGGATC GCTATGGCGG TCTGAAACAT
TAA
 
Protein sequence
MASKIEILKA NLEAALGARV VSLTEAIGEL TLVVKASDYL EVAKTLRDDP KLRFEQLIDL 
CGVDYQTYGD GAYDGPRFAA VSQLLSVTNN WRLRLRVFAP DDDLPIVASL VDIWTSANWY
EREAFDLYGL VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPEE KRVVYQPVTI
EPREITPRVI REDRYGGLKH