Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2164 |
Symbol | |
ID | 6176363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2415468 |
End bp | 2416070 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641681936 |
Product | NADH dehydrogenase subunit C |
Protein accession | YP_001808859 |
Protein GI | 172061207 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.116898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCA AAATCGAGAT CCTGAAGGCA AACCTCGAAG CCGCGCTCGG CGCGCGCGTG GTGAGCCTCA CCGAAGCGAT CGGTGAACTG ACGCTCGTCG TGAAGGCGAG CGATTACCTC GAAGTCGCAA AGACGCTGCG CGACGATCCG AAGCTCCGTT TCGAGCAACT GATCGACCTC TGCGGCGTCG ACTACCAGAC TTACGGCGAC GGTGCGTACG ACGGCCCGCG TTTTGCGGCC GTGTCGCAAC TGCTGTCGGT CACGAACAAC TGGCGCCTGC GCCTGCGCGT GTTCGCGCCG GACGACGATC TGCCGATCGT GGCATCGCTC GTCGACATCT GGACCTCCGC AAACTGGTAC GAGCGCGAGG CGTTCGACCT GTACGGCCTC GTGTTCGAGG GGCACCCCGA CCTGCGCCGC ATCCTCACCG ACTACGGCTT CATCGGCCAT CCGTTCCGCA AGGACTTCCC GGTGTCGGGC TATGTCGAAA TGCGTTACGA CCCGGAAGAG AAGCGGGTCG TCTATCAGCC GGTGACGATC GAGCCGCGCG AAATCACGCC GCGCGTGATC CGCGAGGATC GCTATGGCGG TCTGAAACAT TAA
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Protein sequence | MASKIEILKA NLEAALGARV VSLTEAIGEL TLVVKASDYL EVAKTLRDDP KLRFEQLIDL CGVDYQTYGD GAYDGPRFAA VSQLLSVTNN WRLRLRVFAP DDDLPIVASL VDIWTSANWY EREAFDLYGL VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPEE KRVVYQPVTI EPREITPRVI REDRYGGLKH
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