| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2163 |
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| Symbol | |
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| ID | 6176354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2414205 |
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| End bp | 2415458 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641681935 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001808858 |
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| Protein GI | 172061206 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.549103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA TCAAGAACTA CACCCTCAAC TTCGGCCCGC AGCACCCGGC AGCGCACGGC
GTGCTGCGCC TGGTGCTCGA GCTGGACGGC GAAGTCATCC AGCGCGCCGA TCCGCACATC
GGCCTGCTGC ACCGCGCGAC TGAAAAGCTC GCGGAAAACA AGACCTTCAT CCAGTCCGTG
CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAGCACGG CTATGTGCTC
GCGATCGAGC GTCTGCTCGG CATCGACGTG CCCGAGCGCG CGCAGTACAT CCGCGTGCTG
TTCGACGAAA TCACGCGCGT GCTGAACCAC CTGATGTGGA TCGGCGCGCA CGCACTCGAC
GTCGGCGCGA TGGCGGTGTT CCTGTACGCA TTCCGCGAGC GTGAAGACCT GATGGACGTG
TACGAAGCGG TGTCCGGCGC ACGGATGCAC GCGGCGTACT ACCGTCCCGG CGGTGTCTAT
CGCGACCTGC CTGACGCAAT GCCGCAATAC AAGGCGTCGA AGATTCGCAA CGAGAAGGCG
CTCGCGAAGA TGAACGAAGC GCGCAGCGGC TCGGTGCTCG ACTTCATCGA CGACTTCTTC
ACGCGCTTCC CGAAGTGCGT CGACGAATAC GAAACGCTGC TGACCGACAA CCGGATCTGG
AAACAGCGTC TGGTCGGGAT CGGTGTCGTC AGCCCGGAAC GCGCGCTGCA GATGGGCCTG
ACGGGCCCGA TGCTGCGCGG TTCGGGTATC GCGTGGGATC TGCGCAAGAA GCAGCCGTAC
GAAGTGTACG ACCGCATGGA TTTCGACGTG CCGGTCGGCG TGAACGGCGA CTGCTACGAC
CGCTATCTGG TGCGCGTCGA AGAAATGCGC CAATCGATCC GCATCGCGAA ACAGTGTATT
GAGTGGCTCC GCAAGAATCC GGGCCCGGTG ATGACGGACA ATCACAAGGT TGCACCGCCG
TCGCGCGTCG GCATGAAGAC CAACATGGAA GACTTGATTC ACCACTTCAA GCTCTTCACC
GAAGGTTTTC ACGTGCCGGA AGGCGAGGCG TACGCAGCAG TCGAGCATCC GAAGGGCGAA
TTCGGCATCT ACCTCGTGTC GGACGGTGCC AACAAGCCGT ATCGCCTCAA GATTCGCGCC
CCGGGCTTCG CGCATCTCGC GTCGCTCGAC GAAATGGCGC GCGGCCACAT GATTGCCGAC
GCCGTCACGA TCATCGGTAC GCAGGACATC GTGTTCGGCG AAATCGATCG CTAA
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| Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AENKTFIQSV
PYMDRLDYVS MMVNEHGYVL AIERLLGIDV PERAQYIRVL FDEITRVLNH LMWIGAHALD
VGAMAVFLYA FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPDAMPQY KASKIRNEKA
LAKMNEARSG SVLDFIDDFF TRFPKCVDEY ETLLTDNRIW KQRLVGIGVV SPERALQMGL
TGPMLRGSGI AWDLRKKQPY EVYDRMDFDV PVGVNGDCYD RYLVRVEEMR QSIRIAKQCI
EWLRKNPGPV MTDNHKVAPP SRVGMKTNME DLIHHFKLFT EGFHVPEGEA YAAVEHPKGE
FGIYLVSDGA NKPYRLKIRA PGFAHLASLD EMARGHMIAD AVTIIGTQDI VFGEIDR
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