Gene BamMC406_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2146 
Symbol 
ID6176130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2397140 
End bp2397616 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID641681918 
Productdehydratase 
Protein accessionYP_001808841 
Protein GI172061189 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.235602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.461227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG TGACATTGCC GCTGATCGCG TCGCCGCAGG CGCTCCATGC ACAGGTCGGC 
GCGGAACCGC TGGCAAGCGG CTGGGTCGAG ATCGACCAGC GTCGGGTCGA CGGTTTCGCC
GACGCGACCG GCGATCGCCA GTGGATCCAC GTCGATCCCG AGCGCGCGCG GCGCGAATCG
CCGTTCGGCG GTCCGATCGC GCACGGATTC CTGACGCTGT CGCTGATTCC CGCGCTGATG
GCCGATGCGA TGCGCTTCGA GCAGAAGATG GGCGTGAACT ACGGACTGAA TCGCGTGCGG
TTCCTGAAGC CGGTGCCGGT CGGCACGCGT GTGCGCGCGC TGTTCGCGGT GAAGGAAACC
GCGGAGGCCG CGCGGGGCGG CGTGCAGGTC ACATGGTCGG TATCGATGCA GGCCGAGCGT
CGCGACACGC CGTTGCTTGT TTGCGCGGCG GAATTCATCA CGCTGCACTA CTTCTGA
 
Protein sequence
MTDVTLPLIA SPQALHAQVG AEPLASGWVE IDQRRVDGFA DATGDRQWIH VDPERARRES 
PFGGPIAHGF LTLSLIPALM ADAMRFEQKM GVNYGLNRVR FLKPVPVGTR VRALFAVKET
AEAARGGVQV TWSVSMQAER RDTPLLVCAA EFITLHYF