| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2127 |
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| Symbol | |
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| ID | 6176421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2372878 |
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| End bp | 2374968 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681894 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001808822 |
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| Protein GI | 172061170 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.929321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC ATCACGCCGA AGTCGGCGAC GCGCTCGACG AATCGAAATT CGTGACCTTC
GAAGGGTCGC CATTTCAGCT ATACCAGCCG TATCCGCCCG CAGGCGACCA ACCGACCGCG
ATCGAGACGC TCGTCGAAGG TGTCGGCGAC GGCCTCGCAT TCCAGACGCT GCTCGGCGTG
ACGGGGTCGG GCAAGACCTT CACGATGGCG AACACGATCG CGCGGCTCGG CCGCCCGGCG
ATCGTGTTCG CGCCGAACAA GACGCTCGCG GCGCAGCTCT ACGCGGAGTT CCGCGAGTTC
TTCCCGCGCA ATGCGGTCGA GTACTTCGTC TCGTACTACG ACTATTACCA GCCGGAAGCG
TACGTGCCGC AGCGCGACCT GTTCATCGAG AAGGACTCGT CGATCAACGA GCACATCGAG
CAGATGCGGC TGTCGGCGAC GAAGAGCCTG ATGGAGCGCC GCGACGTGGT GATCGTCGCG
ACGGTGTCGG CGATCTACGG TATCGGCAAC CCGTCCGAGT ACCACAAGAT GATCCTGACG
CTGCGCACCG GCGACAAGCT CGGCCAGCGC GACGTGATCG CGCGGTTGAT CGCGATGCAG
TACTCGCGCA ACGAACAGGA CTTCCAGCGC GGCACGTTCC GCGTGCGCGG CGACACGATC
GACATCTTCC CGGCCGAGCA CGCGGAGATG GCCGTGCGCG TCGAGCTGTT CGACGACGAG
GTCGAGACGC TGCAGCTGTT CGACCCGCTG ACCGGGCGCG TGCGGCAGAA GATTCCGCGC
TTCACGGTGT ATCCGTCGTC GCACTACGTG ACGCCGCGCG ACACCGTGAT GCGTGCGGTC
GAGACGATCA AGGAGGAATT GCGCGAGCGC CTCGAGTTCT TTCACCGCGA CGGCAAGCTC
GTCGAGGCGC AGCGCCTCGA GCAGCGCACG CGCTTCGATC TCGAGATGCT GCAGGAGCTC
GGCTTCTGCA AGGGTATCGA GAACTACTCG CGGCACTTCT CGGGCGCCGC GCCCGGCGAG
CCGCCGCCGA CGCTCGTCGA CTACCTGCCG CCCGATGCGC TGATGCTGCT CGACGAATCG
CACGTGCTGA TCGGCCAGTT GAACGGCATG TACAACGGCG ACCGCGCGCG CAAGGAGAAT
CTCGTCAACT ACGGATTCCG GCTGCCGTCG GCGCTGGACA ACCGGCCGCT CAAGTTCCCG
GAGTTCGAAC GCAAGATGCG CCAGGTGGTG TTCGTGTCGG CCACGCCTGC CGACTACGAG
AAGCGCGTGA CGGGGCAGAT CGCCGAGCAG GTGGTGCGGC CGACGGGTCT CGTCGATCCG
GAAATCGAAG TGCGCCCGGC CAGCTCGCAG GTCGACGACG TGCTGACCGA GATCAACGCG
CGCGTGAACG CCGGCGAGCG CGTGCTGATC ACCGTGCTGA CGAAGCGGAT GGCCGAGCAG
CTCACCGAGT TCCTCGCCGA CCATGGCGTC AAGGTGCGCT ACCTGCACAG CGACATCGAC
ACGGTGGAGC GGGTCGAGAT CATCCGCGAC CTGCGACTCG GCACGTTCGA CGTGCTGGTC
GGGATCAACC TGCTGCGCGA GGGCCTGGAC ATTCCGGAGG TGTCGCTCGT CGCGATTCTG
GACGCGGACA AGGAAGGCTT CCTGCGCGCC GAGCGCTCGC TGATCCAGAC GATCGGCCGC
GCGGCGCGCA ACGTGAACGG CAAGGCGATC CTCTACGCCG ACACGATGAC CGAATCGATG
AAGCGCGCGA TCGGCGAGAC CGAGCGGCGC CGTGCGAAGC AGATCGCGCA CAACGAGAAG
ATGGGCATCA CGCCGCGCGG CGTCGTGAAG CGCATCAAGG ACATCATCGA CGGCGTCTAC
AACGCCGACG ACGCACGCGC CGAGCTGAAG GAAGCGCAGC AACGCGCGAA GTTCGAGGAC
ATGTCGGAAA AGCAGATCGC GAAAGAAATC AAGCGGCTCG AAAAGCAGAT GGCCGACTAC
GCGAAGAACC TCGAGTTCGA AAAGGCTGCG GCCACCCGCG ACCAGCTGGC GTTGCTGCGC
GAACGCGTAT TCGGCGCGAA TGTGGGCGAC CATATCAGCG GCGGCCGGTA A
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| Protein sequence | MSEHHAEVGD ALDESKFVTF EGSPFQLYQP YPPAGDQPTA IETLVEGVGD GLAFQTLLGV
TGSGKTFTMA NTIARLGRPA IVFAPNKTLA AQLYAEFREF FPRNAVEYFV SYYDYYQPEA
YVPQRDLFIE KDSSINEHIE QMRLSATKSL MERRDVVIVA TVSAIYGIGN PSEYHKMILT
LRTGDKLGQR DVIARLIAMQ YSRNEQDFQR GTFRVRGDTI DIFPAEHAEM AVRVELFDDE
VETLQLFDPL TGRVRQKIPR FTVYPSSHYV TPRDTVMRAV ETIKEELRER LEFFHRDGKL
VEAQRLEQRT RFDLEMLQEL GFCKGIENYS RHFSGAAPGE PPPTLVDYLP PDALMLLDES
HVLIGQLNGM YNGDRARKEN LVNYGFRLPS ALDNRPLKFP EFERKMRQVV FVSATPADYE
KRVTGQIAEQ VVRPTGLVDP EIEVRPASSQ VDDVLTEINA RVNAGERVLI TVLTKRMAEQ
LTEFLADHGV KVRYLHSDID TVERVEIIRD LRLGTFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNVNGKAI LYADTMTESM KRAIGETERR RAKQIAHNEK
MGITPRGVVK RIKDIIDGVY NADDARAELK EAQQRAKFED MSEKQIAKEI KRLEKQMADY
AKNLEFEKAA ATRDQLALLR ERVFGANVGD HISGGR
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