Gene BamMC406_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2117 
Symbol 
ID6178852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2364598 
End bp2365329 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID641681884 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001808812 
Protein GI172061160 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCT ACGGTATCGC GCACGTCTGG GCGCAAGGTG ATTTCGTCAC GCGCGCCATT 
GCGATCACGC TGCTCGTGAT GTCGGTCCTG TCGTGGATCG TGATCATCGT CAAGGGCTGG
AACGTGATTC GCCTGAACCG CCTTACGAAG AATGCGGAAC AGGCGTTCTG GCATTCGGAC
GACTTCGAAG ACGGCATCAA GAAGCTCGGT CTCACCGCAT CGACGCCGAG CGACAACCCG
TTCCTCGCGC TCGCGCTGTC GGGCAAGGAA GCCGCCGATC ACCACCATCA GACGCAGCCG
CACCTGCACG ACCGCATGGA CGTGTCCGAC TGGGTCACGC GCTGCCTGAA GGACACGATG
GACGAAGGCA TCTCGCGCAT GCAGGCCGGC CTCGCGATTC TCGCGTCGAT CGGCAGCACG
GCGCCGTTCG TCGGCCTGTT CGGCACGGTC TGGGGCATCT ACCACGCATT GCTCGTGATC
GGCGCAACCG GCCAGACGTC GATCGACCAG GTCGCGGGCC CGGTCGGCGA ATCGCTGATC
ATGACGGCCT TCGGCCTGTT CGTCGCGATT CCGGCGGTGC TCGGCTACAA CGCGCTGACC
CGCGCGAACA AGGGTGTCGT CAGCAAGCTG CGCCGCTTCG CACACGGTCT GCACGCCTAC
TTCGTGACGG GCGCGCGCCT CGCGTCGTCG TCGCCCCGCG ACGGCCTGCG TCTCGCGACG
CGCGCCAGCT GA
 
Protein sequence
MQSYGIAHVW AQGDFVTRAI AITLLVMSVL SWIVIIVKGW NVIRLNRLTK NAEQAFWHSD 
DFEDGIKKLG LTASTPSDNP FLALALSGKE AADHHHQTQP HLHDRMDVSD WVTRCLKDTM
DEGISRMQAG LAILASIGST APFVGLFGTV WGIYHALLVI GATGQTSIDQ VAGPVGESLI
MTAFGLFVAI PAVLGYNALT RANKGVVSKL RRFAHGLHAY FVTGARLASS SPRDGLRLAT
RAS