| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2107 |
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| Symbol | |
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| ID | 6177461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2353705 |
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| End bp | 2355720 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681874 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001808802 |
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| Protein GI | 172061150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.911895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGC ATCGACTGAT TCGCGCGTAC GCGCTCTATA CGCTCGGCTT TCTGGGCTTC
GTGCTGCTGC TGTGGCGGAT CGAGCGCGCG GCCGGCTCCG GCGTCTGGAT CGGCTACGTG
TTCCTGTTCG TGCCGATCGC CGTGTATGCG GTGATCGGGC TGCTGTCGCG CACGTCCGAT
CTCGTCGAAT ACTACGTGGC GGGGCGGCGC GTGCCGTCCG CGTTCAACGG GATGGCGACC
GCGGCCGACT GGCTGTCGGC CGCGTCGTTC ATAGGTCTCG CCGGGTCGCT TTACGCGACC
GGCTACGATG CGCTCGCCTA CGTGATGGGT TGGACGGGCG GGTTCTGCCT CGTCGCGTTC
CTGCTCGCGC CGTACGTGCG CAAGCTCGCG CGCTACACGA TCCCCGATTT TCTCGGCACG
CGCTTTTCGA GTACGGCCGT GCGCGCGCTT GCGGCCGGTG CGGCGATCCT GTGCTCGTTC
GTTTATCTGG TCGCGCAGAT CCAGGGGATC GGGCTGATCG CGACGCGCTT CATTGGCGTC
GACTTCGCGA TCGGCATCTT CTGCGGGCTC GCGGGCATTC TCGTCTGCTC GTTTCTCGGC
GGCATGCGCG CGGTCACGTG GACGCAAGTC GCGCAGTACA TCATCCTGAT CAGCGCGATC
CTGATCCCCG TGTCGCTGAT CGCGATGAAG AACGGGCTCG GGCCGGTGCC GCAGTTCAAT
TACGGCAAGC TGATGGAGCG TGTGGCGGCG CGCGAGGCGC AGGTGCGCGA CGCGGCCGAG
GAGCAGCAGG TGCGCGATGC GTATCGCCGG CAGGCTGCGC TCGTCCAGGG GCAGCTCGAT
CGCTTGCCCG GATCGTATGC GGACGCACGC CGGCAACTCG TCGACCAGCT TGCGGACCTG
CGGCGCCACA ACGGGCCGCT GCGCGAGATC AACCAGCTCG AGCGCGAGCT GGCCGACTTC
CCGCGCGACC CGACGGGCGC CCGTGTGATC TGGACCCAGG CGCGCGACGA CCTGCTGGCA
CGCGCCGAGC CGCCCGTGCC GATGCACGAG CCGTTTCCCG CCGCGAACGA CGACGAGCGC
AAGCCGCGCG AGCGGAATTT CCTTGCGCTG CTGCTGTGCC TGTCGCTCGG CACCGCGAGC
CTGCCGCACA TCCTCACGCG CTACAACACG ACGACGTCGG TGGCGTCCGC GCGGCGCTCG
GTCGGCTGGA CGCTGTTCTT CATCGCGCTG TTCTACCTGA GCGTGCCGGT GCTTGCGGTG
ATGATCAAGT ACGAGATTCT CACCAGCCTT GTCGGGCGGC CGATCGCCGA ACTGCCTGCG
TGGGTCACGC AGTGGCATCA CTTCGAACCG GATCTGATCA GCGTCGTCGA GGTGATTCGC
GACGGCATCG TCCACTGGTC GGAAATCCAG ATGCAGCCGG ACATGGTCGT GCTGGCCGCG
CCGGAGATCG CGGGGCTGCC GTATGTCGTG TCGGGGTTGA TCGCGGCAGG TGCGTTGGCT
GCCGCGCTGT CGACCGCGGA CGGATTGCTG CTGACGATCG CGAATGCGTT GTCGCACGAC
GTCTATTACT GCATGGTCGC GCCCGATGCA TCGAGCCAGC GGCGCGTGAC GGTCTCGAAG
GTGCTGCTGC TCGGCGTTGC GCTGTTCGCG TCGTATGTCG CGTCGCTCAA TACGGGGAAG
ATTCTGTTTC TCGTCGGTGC GGCGTTTTCG CTCGCGGCGT CCAGTTTCTT TCCGGTGCTC
GTGCTCGGGG TGTTCTGGAA ACGGACGACG ACGCGCGGTG CGATCGCCGG GATGGTGACG
GGGCTTGCCG TTTGTGTGTA TTACATCGTG TCGACGTATC CGTTTTTCAC GCAGCTCACC
GGGTTTGCCG GTCGGACGTG GTTCGGGATC GAGCCGATCA GTTCAGGCGT GTTCGGGGTG
CCGGCGGGGT TTGTGGTGGC GATCGTGGTG AGTCTGGTCG ATCGGGAGCC GGATGAGTAT
ACGCGGGCGT TGGTGGATTA TATTCGGCAT CCGTGA
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| Protein sequence | MLTHRLIRAY ALYTLGFLGF VLLLWRIERA AGSGVWIGYV FLFVPIAVYA VIGLLSRTSD
LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYAT GYDALAYVMG WTGGFCLVAF
LLAPYVRKLA RYTIPDFLGT RFSSTAVRAL AAGAAILCSF VYLVAQIQGI GLIATRFIGV
DFAIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILISAI LIPVSLIAMK NGLGPVPQFN
YGKLMERVAA REAQVRDAAE EQQVRDAYRR QAALVQGQLD RLPGSYADAR RQLVDQLADL
RRHNGPLREI NQLERELADF PRDPTGARVI WTQARDDLLA RAEPPVPMHE PFPAANDDER
KPRERNFLAL LLCLSLGTAS LPHILTRYNT TTSVASARRS VGWTLFFIAL FYLSVPVLAV
MIKYEILTSL VGRPIAELPA WVTQWHHFEP DLISVVEVIR DGIVHWSEIQ MQPDMVVLAA
PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYCMVAPDA SSQRRVTVSK
VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAIAGMVT
GLAVCVYYIV STYPFFTQLT GFAGRTWFGI EPISSGVFGV PAGFVVAIVV SLVDREPDEY
TRALVDYIRH P
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