Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2085 |
Symbol | |
ID | 6177042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2330153 |
End bp | 2330791 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641681853 |
Product | hypothetical protein |
Protein accession | YP_001808782 |
Protein GI | 172061130 |
COG category | [S] Function unknown |
COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.181968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC TCGACCAGGC GCCGGTGCAC GCAACGACGA TCCGCTCGGT GGATCTCGTT GCGTCACCGT GGAAGAACGG CGGCGGCGTG ACGCGCGAAA TCGCGGCATT TTCTCCGCCG GGAACGTCCG CCGGGGCGCT GCCGGGCGCC GCGCTCGATG CGTTCGCATG GCGCGTGAGC GTCGCGGACG TCGACGCGGC CGGGCCGTTC TCGCGTTTCG ACGGCGTCGA CCGCACACTC GTGCTGCTGT CCGGCGCGGG CATGACGCTC ACGGAAGCGG GCGGCGCGCG CCATGTGCTC GATGCGCCGC TCGCCCGTGC GGATTTCGCC GGCGAAACGG CGATCGACGC GACGCTGCAC GACGGCCCGA CCCGCGACTT CAACCTGATG ACGCGCCGCT CGGCCGCGCG CGGGACCGTC GACGTGTGGC GCGAAGGCAC GCACCGCGTC GAGCGCGCCG ATACCGTGCT GCTGTTCTGC GCGAGCGGCG CGGTCGGCGT CGACATCGAC GGCGCGCATT ACGCGCTGCA GGAAATGGAC ACGCTGCGGC TCGACGGGCC GAGGCGTGCG TTTGACGTCG TCGTGAGCGG AGGCGGCGCG CTGCTCGCCG TGTCGCTCGC CGTCGGCGCA CGGGACTGA
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Protein sequence | MTALDQAPVH ATTIRSVDLV ASPWKNGGGV TREIAAFSPP GTSAGALPGA ALDAFAWRVS VADVDAAGPF SRFDGVDRTL VLLSGAGMTL TEAGGARHVL DAPLARADFA GETAIDATLH DGPTRDFNLM TRRSAARGTV DVWREGTHRV ERADTVLLFC ASGAVGVDID GAHYALQEMD TLRLDGPRRA FDVVVSGGGA LLAVSLAVGA RD
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