Gene BamMC406_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2085 
Symbol 
ID6177042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2330153 
End bp2330791 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content73% 
IMG OID641681853 
Producthypothetical protein 
Protein accessionYP_001808782 
Protein GI172061130 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.181968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC TCGACCAGGC GCCGGTGCAC GCAACGACGA TCCGCTCGGT GGATCTCGTT 
GCGTCACCGT GGAAGAACGG CGGCGGCGTG ACGCGCGAAA TCGCGGCATT TTCTCCGCCG
GGAACGTCCG CCGGGGCGCT GCCGGGCGCC GCGCTCGATG CGTTCGCATG GCGCGTGAGC
GTCGCGGACG TCGACGCGGC CGGGCCGTTC TCGCGTTTCG ACGGCGTCGA CCGCACACTC
GTGCTGCTGT CCGGCGCGGG CATGACGCTC ACGGAAGCGG GCGGCGCGCG CCATGTGCTC
GATGCGCCGC TCGCCCGTGC GGATTTCGCC GGCGAAACGG CGATCGACGC GACGCTGCAC
GACGGCCCGA CCCGCGACTT CAACCTGATG ACGCGCCGCT CGGCCGCGCG CGGGACCGTC
GACGTGTGGC GCGAAGGCAC GCACCGCGTC GAGCGCGCCG ATACCGTGCT GCTGTTCTGC
GCGAGCGGCG CGGTCGGCGT CGACATCGAC GGCGCGCATT ACGCGCTGCA GGAAATGGAC
ACGCTGCGGC TCGACGGGCC GAGGCGTGCG TTTGACGTCG TCGTGAGCGG AGGCGGCGCG
CTGCTCGCCG TGTCGCTCGC CGTCGGCGCA CGGGACTGA
 
Protein sequence
MTALDQAPVH ATTIRSVDLV ASPWKNGGGV TREIAAFSPP GTSAGALPGA ALDAFAWRVS 
VADVDAAGPF SRFDGVDRTL VLLSGAGMTL TEAGGARHVL DAPLARADFA GETAIDATLH
DGPTRDFNLM TRRSAARGTV DVWREGTHRV ERADTVLLFC ASGAVGVDID GAHYALQEMD
TLRLDGPRRA FDVVVSGGGA LLAVSLAVGA RD