Gene BamMC406_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2084 
Symbol 
ID6177033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2328925 
End bp2330148 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content70% 
IMG OID641681852 
Productimidazolonepropionase 
Protein accessionYP_001808781 
Protein GI172061129 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.340363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA CTGTCTGGCA TCACCTGAGG CTGTGTCCGC ACGGCCACCC CGACGAAACC 
ATCGACGACG CGGCGATCGC CGTCGACGAA ACCGGCACGA TCGTGTGGCT CGGCGCGTTC
TCCGCGCTGC CGCACGGTTA CGCGCACTGG CAGCGCGAAG ACCTGCACGG CGCGTGGGTG
ACGCCGGGCC TCGTCGACTG CCACACGCAC CTCGTGTACG GCGGCACGCG CGCCGACGAG
TTCGCGCAGC GCCTCGCCGG CGTCAGCTAC GAGGAGATCG CGCGGCAGGG CGGCGGGATC
GTGTCGACGG TGCGCGCGAC GCGCGCTGCC GACGAGACGA CGCTGTTCGT GCAGGCCGCC
GCACGACTGC AGCCGCTGCT CGCGGAAGGC GTGAGCGCGA TCGAGATCAA GTCGGGCTAC
GGGCTCGACC TCGCGAGCGA GCGCAAGATG CTGCGCGTCG CGCGCCAGCT CGGCGAGCGC
TTCCCGGTCA GCGTCTACAC GACGTTCCTC GGCGCGCACG CGCTGCCGCC GGAATATGCG
GGCCGCGCGG ACGCATACAT CGACGAGGTA TGCGAACGGA TGCTGCCGAC GCTGGCCGAC
GAAGGCCTCG TCGACGCGGT CGACGTGTTC TGCGAGCGCA TCGGCTTTTC GCTCGCGCAG
ACCGAGCGCG TGTTCGAGGC CGCGACGCGG CGCGGCCTGC CGGTGAAGCT GCACGCGGAG
CAGCTGTCGA ACGCGGGCGG CACCGCGCTC GCCGCGCGTT ATCGCGCGCT GTCCGCCGAC
CACCTCGAAT TTCTCGACGA AGCCGGCGTC GAGGCAATGA AGGCGGCCGG TACGGTCGCC
GTGCTGTTGC CCGGCGCGTA CTACTTCATC CGCGAAACGC AATTGCCGCC GATCGAGCTG
CTGCGCAAGC ACGGCGTGCC GATCGCGCTC GCGACCGATC ACAACCCCGG CACGTCGCCG
CTCGAATCGC TGCTGCTGAC GCTGAACATG GGCTGCACGC TGTTCCGGAT GACGGTGCCC
GAGGTGCTGC AGGGCGTGAC GCGCCATGCG GCCGCGGCGC TCGGCCGTGC CGATCGTCAC
GGTGCGCTCG AGATCGGTCG CCAGGCCGAT TTCGCGGTCT GGTCGGTCGG CTCGCTGGCG
GAGCTCGCTT ACTGGATCGG CCGTCCGCTG TGCGAGCAAG TCGTGCGCGG CGGTGCGACG
GTGTTTCGCC GGATGAACGG CTAG
 
Protein sequence
MKPTVWHHLR LCPHGHPDET IDDAAIAVDE TGTIVWLGAF SALPHGYAHW QREDLHGAWV 
TPGLVDCHTH LVYGGTRADE FAQRLAGVSY EEIARQGGGI VSTVRATRAA DETTLFVQAA
ARLQPLLAEG VSAIEIKSGY GLDLASERKM LRVARQLGER FPVSVYTTFL GAHALPPEYA
GRADAYIDEV CERMLPTLAD EGLVDAVDVF CERIGFSLAQ TERVFEAATR RGLPVKLHAE
QLSNAGGTAL AARYRALSAD HLEFLDEAGV EAMKAAGTVA VLLPGAYYFI RETQLPPIEL
LRKHGVPIAL ATDHNPGTSP LESLLLTLNM GCTLFRMTVP EVLQGVTRHA AAALGRADRH
GALEIGRQAD FAVWSVGSLA ELAYWIGRPL CEQVVRGGAT VFRRMNG