Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2047 |
Symbol | aceE |
ID | 6176334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2279989 |
End bp | 2282685 |
Gene Length | 2697 bp |
Protein Length | 898 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681813 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_001808744 |
Protein GI | 172061092 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.709633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCTG TACCGAACGA AGTGATGAAG TATGTCGCCG CCGAACGTGA CGACGACCCG CAAGAAACCG TCGAGTGGCT CGAGTCGCTC GATGGCGTGA TCTCCTCCGT GGGCACCGGC CGCGCGCACT ACCTGATCGA AAAGCAGATC GAGTTCGCCC GCATGCACGG CGAACACCTG CCGTTCTCCG CCAACACCCC GTACATCAAC ACGATTCCCG TCGCCGCGCA GGCGAAGATC CCGGGCGACC AGGACATCGA GCACCGCATT CGTTCGTACA CGCGCTGGAA CGCGCTGGCG ATGGTGCTGC GCGCGGGCAA GGACACGAAC GTCGGCGGCC ACATCGCGTC GTTCGCGTCG GCCGCGACGC TCTATGACGT CGGCTACAAC CACTTCTGGC ACGCGGCGTC CGACCAGCAC GGCGGCGATC TCGTGTTCGT GCAGGGTCAC TCGTCGCCGG GCGTGTATTC GCGCGCGTTC CTGCTCGGCC GCCTGTCGGA AGAGCAGCTC GACAACTTCC GCCAGGAAGT CGACGGCAAG GGCATCTCGT CGTACCCGCA CCCGTGGCTG ATGCCGGACT TCTGGCAGTT CCCGACGGTG TCGATGGGTC TCGGCCCGAT CATGGCGATC TACCAGGCCC GCTTCATGAA GTACCTGGAA TCGCGCGGCA TCGCGAAGAC GGCCGGCCGC AAGGTCTGGG CGTTCCTCGG CGACGGCGAG ACGGACGAGC CGGAATCGCT CGGCGCGATC GGCATGGCGA GCCGCGAGAA GCTCGACAAC CTGGTGTTCG TGATCAACTG CAACCTGCAG CGTCTCGACG GTCCGGTGCG CGGCAACGGC AAGATCATCC AGGAACTGGA ATCGGAATTC CGCGGTGCCG GCTGGAACGT GATCAAGGTC ATTTGGGGCA GCCGCTGGGA TGCGCTGTTC GCACGCGACC AGACGGGCGC GCTGATGCGC CGCATGATGG AAGTCGTCGA CGGCGAATAC CAGACGTACA AGTCGGAGTC GGGCGCGTTC GTTCGCGAAC ACTTCTTCAA CACGCCTGAA CTGAAGGCGC TCGTCGCCGA CTGGTCGGAC GACGACATCT GGGCGCTGAA CCGTGGCGGC CACGATCCGC ACAAGATCTA CGCGGCATTC CACGAAGCGA CCAACACGAA GGGCGCGCCG ACCGTCATCC TCGCGAAGAC CATCAAGGGC TACGGGATGG GCGAGTCGGG CCAGGCGATG AACATCACGC ACCAGCAGAA GAAGCTGCCG GTCGAGCAAC TGAAGAAGTT CCGTGACCAG TTCCGCCTGC CGATCGCCGA CGAGCAGATC GCCGACGTGC CGTACCTGAA GTTCGAGGAA GGCTCGAAGG AACTCGAATA CATGCGCCAG AAGCGCATGG ACCTCGGCGG CTACCTGCCG CATCGCCGCG AAAAGGCGAC CTCGCTGCCG GTGCCGGCGC TCGACGCGTT CGAGCCGCTG CTGAAGGGCA CGGGCGAAGG CCGCGAGATC TCGACGACGA TGGCGTTCGT GCGGGTCCTG AACATCCTGT TGAAGGACAA GGCGCTCGGC AAGCGCGTCG TGCCGATCGT CCCGGACGAA TCGCGTACGT TCGGCATGGA AGGCCTGTTC CGCCAGATCG GTATCTGGAA CCAGGAAGGC CAGAAATACG TGCCGGAAGA TTCCGACCAG CTGATGTTCT ACAAGGAATC GGAAACCGGC CAGATCCTGC AGGAAGGCAT CAACGAAGCG GGCGGCATGT GCGACTGGAT CGCGGCGGCG ACGTCGTATT CGACGCACGG CGAGATCATG GTGCCGTTCT ACATCTTCTA TTCGATGTTC GGCTTCCAGC GGATCGGCGA CCTCGCATGG GCGGCGGGCG ACATGCGCTC GCGCGGCTTC CTGCTCGGCG GCACCGCGGG CCGCACGACG CTGAACGGCG AAGGCCTGCA GCACGAAGAC GGTCACTCGC TCCTGTGGGC GGCATCGGTG CCGAACTGCG TGAGCTACGA CCCGACGTTC GGCTACGAGC TCGCGGTGAT CATCCAGGAC GGCCTGCGCC GCATGGTGCA GGAGCAGGAA GACGTGTACT ACTACGTCAC GGTGATGAAC GAGAACTACG AGCACCCGGC GATTCCGCAG GGCGAGCACG TGGCGGCCGA CATCATCAAG GGCATGTATG CGTTCAAGAA GGCCGACGCC GACCAGAAGG CGCCGCGCGT GCAGCTGCTC GGCGCGGGCA CGATCTTCAA CGAAGTGATC GCCGCCGCCG ACCTGCTGAA GAACGACTGG GGCGTCGCGG CCGATCTGTG GAGCGTGCCG AGCTTCACCG AACTCGCGCG TGAAGGCCAC GATGTCGAGC GCTGGAACCT GCTCCATCCG ACCGAGGAGC GTCGCCTGTC GCACGTGCAG AAGTGCCTGA AGGACACGCA GGGTCCGGTC ATCGCATCGA CCGACTACGT GCGCGCGCTG GTCGACCAGA TCCGTGGTCA GATCGATCGC CGCTTCGTCG TGCTGGGCAC GGACGGCTTC GGTCGTTCGG ACACCCGCGA AAAGCTGCGT CACTTCTTCG AAGTCGACCG TCACTGGGTC ACCGTCGCCG CGCTCAACGC GCTGGCCGAC GAAGGCACGA TCGAGCGCAA GGTGGTCGCG GACGCGATCG CCAAGTACAA CCTCGATCCG TCCAAGCCCA ACCCGATGAC CGTTTAA
|
Protein sequence | MSAVPNEVMK YVAAERDDDP QETVEWLESL DGVISSVGTG RAHYLIEKQI EFARMHGEHL PFSANTPYIN TIPVAAQAKI PGDQDIEHRI RSYTRWNALA MVLRAGKDTN VGGHIASFAS AATLYDVGYN HFWHAASDQH GGDLVFVQGH SSPGVYSRAF LLGRLSEEQL DNFRQEVDGK GISSYPHPWL MPDFWQFPTV SMGLGPIMAI YQARFMKYLE SRGIAKTAGR KVWAFLGDGE TDEPESLGAI GMASREKLDN LVFVINCNLQ RLDGPVRGNG KIIQELESEF RGAGWNVIKV IWGSRWDALF ARDQTGALMR RMMEVVDGEY QTYKSESGAF VREHFFNTPE LKALVADWSD DDIWALNRGG HDPHKIYAAF HEATNTKGAP TVILAKTIKG YGMGESGQAM NITHQQKKLP VEQLKKFRDQ FRLPIADEQI ADVPYLKFEE GSKELEYMRQ KRMDLGGYLP HRREKATSLP VPALDAFEPL LKGTGEGREI STTMAFVRVL NILLKDKALG KRVVPIVPDE SRTFGMEGLF RQIGIWNQEG QKYVPEDSDQ LMFYKESETG QILQEGINEA GGMCDWIAAA TSYSTHGEIM VPFYIFYSMF GFQRIGDLAW AAGDMRSRGF LLGGTAGRTT LNGEGLQHED GHSLLWAASV PNCVSYDPTF GYELAVIIQD GLRRMVQEQE DVYYYVTVMN ENYEHPAIPQ GEHVAADIIK GMYAFKKADA DQKAPRVQLL GAGTIFNEVI AAADLLKNDW GVAADLWSVP SFTELAREGH DVERWNLLHP TEERRLSHVQ KCLKDTQGPV IASTDYVRAL VDQIRGQIDR RFVVLGTDGF GRSDTREKLR HFFEVDRHWV TVAALNALAD EGTIERKVVA DAIAKYNLDP SKPNPMTV
|
| |