| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2045 |
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| Symbol | |
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| ID | 6176041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2276235 |
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| End bp | 2278013 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681811 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001808742 |
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| Protein GI | 172061090 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC
GAAGTCAACG TCAAGCCAGG CGACGTGATC GAAAAAGAAC AAACGCTCAT CACGCTCGAA
TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACAGTCAA GGAAGTCAAG
GTCAAGGCCG GCGAGAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCAGCAGCC
GGCGACGCCG CACCCGCGAA AGCACCCGAG GCAGCGAAAC CCGCACCGGC TGCGCCCGCT
CCGGCCGCAG CCGCTCCCGC AGCCGCTCCC GCAGCCGCGC CGCAAGCCGG CAGCTACAGC
GGCGCCGCCG ACATCGAGTG CGACATGCTC GTGCTCGGCG CCGGCCCCGG CGGCTATTCG
GCCGCGTTCC GCTCAGCCGA CCTCGGCATG AAGACGGTGC TGGTCGAACG CTACTCGACG
CTCGGCGGCG TATGCCTGAA CGTCGGTTGC ATCCCGTCGA AGGCGCTGCT GCACACGGCA
CTCGTCATCG ACGAAGCCGC GGCGCTCGCA TCGCACGGCA TCACGTTCGG CAAGCCGGAG
GTCGATCTCG ACAAGCTGCG CGACTTCAAG GGCGGCGTCG TCAAGAAACT GACGACGGGC
CTCGCCGGCA TGGCGAAGGC GCGCAAGGTC GAAGTCGTCA CGGGCGTCGG CGCATTCGTC
GATCCGTATC ACATGGAAGT GCAGGGCGAA AACGGCAAGA AGGTCGTCAA GTTCAAGCAG
GCGATCATCG CCGCGGGCTC GCAAGCGGTG AAGCTGCCGT TCATGCCGGA AGACCCGCGC
GTCGTCGATT CGACGGGCGC GCTCGAACTG CGCCAACTGC CGAAGCGGAT GCTCGTGATC
GGCGGCGGCA TCATCGGCCT CGAAATGGCC ACGGTGTATG CGACGCTCGG CGCCGAGATC
GACGTGGTCG AAATGATGGA CGGCCTGATG ATGGGCGCGG ACCGCGATCT CGTGAAGGTC
TGGGAAAAGT ACAACGCGAA GCGCTTCGGC AACGTGATGC TGAAGACCAA GACGGTCGGC
GCGGAAGCGA AGGAAGAAGG CATCTACGTG AAGTTCGAGG GCGAGAAGGC GCCGGCGGAA
GCGCAGCGCT ACGACCTCGT GCTCGTCGCG GTGGGCCGCA GCCCGAACGG CAAGAAGATC
GGCGCCGACA AGGCCGGCGT CGCCGTCACC GACCGCGGCT TCATCGATGT CGACAAGCAG
ATGCGCACGA ACGTCCCGCA CATCTTCGCG ATCGGCGACG TCGTCGGCCA GCCGATGCTC
GCGCACAAGG CCGTGCATGA AGGCCACGTC GCGGCGGAAG CCGCGCACGG CGAGAAGGCG
TACTTCGACG CGCTGCAGAT CCCGTCGGTG GCGTACACCG ATCCGGAAGT GGCGTGGGCC
GGCAAGACGG AAGACCAGTG CAAGGCCGAA GGCATCAAGT ACGGCAAGGC GGTGTTCCCG
TGGGCCGCAT CGGGCCGCGC GATCGCGAAC GGTCGCGACG AAGGCTTCAC GAAGCTGATC
TTCGACGAGG AAACCCATCG CGTGATCGGC GGCGGCATCG TCGGCCTGAA CGCGGGCGAC
CTGATCAGCG AAGTGTGTCT CGCCGTCGAG ATGGGCGCGG ACGCCGAAGA CATCGGCAAG
ACGATCCATC CGCACCCGAC GCTCGGCGAA TCGGTCGGCA TGGCCGCCGA GCTGTACGAA
GGCGTGTGTA CCGATCTGCC GCCGCAACGC AAGAAGTAA
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| Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEVK
VKAGEKVSQG TVIAIVEAAA GDAAPAKAPE AAKPAPAAPA PAAAAPAAAP AAAPQAGSYS
GAADIECDML VLGAGPGGYS AAFRSADLGM KTVLVERYST LGGVCLNVGC IPSKALLHTA
LVIDEAAALA SHGITFGKPE VDLDKLRDFK GGVVKKLTTG LAGMAKARKV EVVTGVGAFV
DPYHMEVQGE NGKKVVKFKQ AIIAAGSQAV KLPFMPEDPR VVDSTGALEL RQLPKRMLVI
GGGIIGLEMA TVYATLGAEI DVVEMMDGLM MGADRDLVKV WEKYNAKRFG NVMLKTKTVG
AEAKEEGIYV KFEGEKAPAE AQRYDLVLVA VGRSPNGKKI GADKAGVAVT DRGFIDVDKQ
MRTNVPHIFA IGDVVGQPML AHKAVHEGHV AAEAAHGEKA YFDALQIPSV AYTDPEVAWA
GKTEDQCKAE GIKYGKAVFP WAASGRAIAN GRDEGFTKLI FDEETHRVIG GGIVGLNAGD
LISEVCLAVE MGADAEDIGK TIHPHPTLGE SVGMAAELYE GVCTDLPPQR KK
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