Gene BamMC406_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2040 
Symbol 
ID6175943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2270377 
End bp2271789 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content68% 
IMG OID641681806 
Producthypothetical protein 
Protein accessionYP_001808737 
Protein GI172061085 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCC AATCGATGCA TTTCAAGGCG CGTGCCGGCC AGAAGCTGGC CGACCAGCGC 
TTGCAGCAGA ACCTGAAGAA GCTGTCGACG AAGTTCGTGT CCGCGCGCGC CGACGCAATG
ACCGCGATCG ACTTCCAGGC GACGCGCGCC GCGCTGAAGG CGCGCCGCAA CCGGGCGCTG
GAGAACCTCG ACGTGTGGCT CGAGGCGTTC GAGCGCGAGG CGGCGCGGCG CGGCACGACG
GTGCTGTTCG CGGAAACAAC CGAGGACGCC GCGCGGCTCG TCGCCGACAT CGCACGACGC
CACGACGTGA AGAAGGTCAT CAAGACGAAG TCGATGGTGT CCGAGGAAAT GCGCCTGAAC
GCGGTGCTCG CCGAGATGGG CGTGCAGTCG ATCGAGACGG ACCTCGGCGA ATACATCCTG
CAGATCAACG ACAACGAGCC GCCGAGCCAC ATCATTGCGC CCGTCGTTCA CAAGGACAAG
GACGAGATCG CCGACCTGTT CGCGCGCACG CATCACCGCG AGCGGCTGAC CGAGATTCCC
GACATGACGC GCGAGGCGCG CGAGGTGCTG CGCCCGCATT TCCTGTCGGC CGACATGGGC
GTGACGGGCG GCAACTTCGT GATCGCCGAG ACGGGTTCGG TCGCGATCGT CACGAACGAA
GGCAACGAAG GCATGTGCAC GGTGATGCCG CGCGTGCATG TCGCGGTGAC GGGCATCGAG
AAGGTGCTGC CGACGCTCGA GGATCTAGCG ACCGCGATGC GTCTGCTGCC GCGTTCGGCC
ACTGGGCAGA AGACGTCGAA CTACTTCTCC CTGCTCACCG GGCCGCGCGG CCCGGGCGAC
GAGGACGGCC CGGAGCACAA CTACGTGGTG CTGGTCGACG GCGGCCGCAC GGGCCTGATC
GGCGGAGAAT TCCAGGAGAT GCTGCGCTGC ATCCGCTGCG GCGCGTGCAT GAACCATTGC
CCGGTGTACC AGAAGGTCGG CGGGCACGCG TACGGCTGGG TCTATCCGGG CCCGATGGGG
TCGGTGCTGA CGCCGAGCTA CGTCGGGCTC GACCGTGCGC TCGACCTGCC GCAGGCCGCG
ACGCTGTGCG GCGAATGCGA CAGCGTCTGC CCGGTGGGGA TCCCGCTGTC GCACCTGTTG
CGCACGCTGC GCGAGAAACA GGTCGAGCGG CATCTGCGAC CGTGGCGCGA GCGAGCCGGA
CTCGCCGCGT GGGGCTTTTT CGCGCGGCGG CCATTGCTTT ATGCGCTGAC GACCAAGCTC
GCGGTGCGCG TGCTCGAGCG GCTCGGCGGC AGCGGCGGCA TGCTGCGGCG CCTGCCGATG
ATGGGCGGCT GGATGGACAC GCGCGACATG CCGACCCCGA CCGGCCGCAC GTTCCGCGAA
CTGTACGCGG CATCGCAAAG CCACCTCGGC TGA
 
Protein sequence
MQVQSMHFKA RAGQKLADQR LQQNLKKLST KFVSARADAM TAIDFQATRA ALKARRNRAL 
ENLDVWLEAF EREAARRGTT VLFAETTEDA ARLVADIARR HDVKKVIKTK SMVSEEMRLN
AVLAEMGVQS IETDLGEYIL QINDNEPPSH IIAPVVHKDK DEIADLFART HHRERLTEIP
DMTREAREVL RPHFLSADMG VTGGNFVIAE TGSVAIVTNE GNEGMCTVMP RVHVAVTGIE
KVLPTLEDLA TAMRLLPRSA TGQKTSNYFS LLTGPRGPGD EDGPEHNYVV LVDGGRTGLI
GGEFQEMLRC IRCGACMNHC PVYQKVGGHA YGWVYPGPMG SVLTPSYVGL DRALDLPQAA
TLCGECDSVC PVGIPLSHLL RTLREKQVER HLRPWRERAG LAAWGFFARR PLLYALTTKL
AVRVLERLGG SGGMLRRLPM MGGWMDTRDM PTPTGRTFRE LYAASQSHLG