| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2026 |
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| Symbol | |
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| ID | 6179073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2257529 |
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| End bp | 2259226 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681792 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001808723 |
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| Protein GI | 172061071 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.698536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA TCGTTACCCG CCCCGTCGCG CCCGCCGACG CCGAAGCGCT CGCGCGCCAC
GGCCTGCATC CCGTCCTCGC GCGGCTGTAC GCGTCGCGCG GCGTGCAGTC CCCGACCGAC
ATCGAGACCG CGCTCGCGCG CCTCGTGCCG CCCACCGAAC TGAAAGGCTG CGCGGATGCC
GCGGCGCTGC TCGCCGACGC GATCGCCGAC AAGCGGCGCC TGCTGGTCGT CGCCGACTAC
GACTGCGACG GCGCGACCGC CTGCGCGGTC GCGGTGCGCG GCCTGCGGAT GTTCGGCGCG
CAGATCGACT ACCTGGTGCC GAACCGCTTC GAATACGGCT ACGGGCTCAC GCCCGAGATC
GTCGAACTCG CGGCCGCGCG CAAGCCCGAC CTGCTGATCA CCGTCGACAA CGGGATCGCG
AGCGTCGCGG GCGTCGAAGC CGCGAATGCA CGCGGCATCG ACGTGCTCGT GACCGACCAC
CACCTGCCCG GCGACGCACT GCCCGCCGCG CGCGCGATCG TCAACCCGAA CCAGCCCGGC
TGCGCGTTCC CGAGCAAGCA CATCGCCGGT GTCGGCGTGA TGTTCTACGT GCTGCTCGCG
CTGCGCGCCG AGTTGCGCCG CCGCGGCGCG TTCGCGAGCA AGGAAGCCGA GCCGCGCCTC
GACGGCCTGC TCGACCTCGT CGCGCTCGGC ACCGTCGCCG ACGTGGTGCG GCTCGACGGC
AACAACCGCG TGCTCGTCGC GCAGGGGCTG CAGCGCATCC GCAACGGCCG CATGCAGCCG
GGCATCGCCG CGCTGTTTCG CGCCGCCGGC CGCGAGGCGC GCACCGCCTC GGGCTTCGAC
CTCGGCTTCG GCCTCGGCCC GCGCCTGAAT GCCGCCGGGC GGCTCTCGGA CATGTCGCTC
GGCATCGAAT GCCTGATCAC CGACGACATC GGCCGCGCGT GGGACCTCGC GCAGCAGCTC
GACGTGATGA ACCGCGAGCG CCGCGAGATC GAGGCCGGCA TGCAGCAGCA GGCGCTCGCC
GACCTCGCCG ACATCGATCC CGCCGACGCG TGCACGATCA CGCTGTTCAA CCCCGAATGG
CACCAGGGCG TGATCGGCAT CGTCGCCGGG CGGCTCAAGG AGAAATTCCA CCGCCCGTCG
TTCACGTTCG CGCATGCGGA CGAAGCCGGC ACACGGGTCA AGGGTTCGGG TCGCTCGATT
CCCGGCTTCC ACCTGCGCGA CGCGCTCGAC CTGGTGTCGA AGCGCGAGCC CGACCTGATC
GTCGCGTTCG GCGGCCACGC GATGGCGGCC GGCCTCACGC TCGGCACCGA CGACGTGCCG
CGCTTCGCGG CCGCGTTCGA GGCGGTGGCG CGCGAGTGGC TGTCCGACGA CGCGCTCGCG
CGCGTGATCG AGACCGACGG CGAACTGGAG GACGCGTATT TCACGCCGCA GTTCGTCGGG
CTGCTCGACG AAGCCGTGTG GGGCCAGGGC TTTCCGGCCC CGCTTTTCTC CGGCGAGTTC
GACGTCGTGT CGCAGTCGCT CGTGAAGGAA AAGCACCTGA AGCTGCAGTT GGCGCGCGGC
CGCCAGCGCT TCAACGCGAT CTGGTTCAAC CACACCGAGC CGCTGCCGGC GAGCGCGCTG
ATCGCGTATC GCCTCGTCGC CGACACGTGG AACGGCGTGA CGCGCGTCCA GCTGATCGTC
GAGCACGCGG CCGGCTGA
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| Protein sequence | MTRIVTRPVA PADAEALARH GLHPVLARLY ASRGVQSPTD IETALARLVP PTELKGCADA
AALLADAIAD KRRLLVVADY DCDGATACAV AVRGLRMFGA QIDYLVPNRF EYGYGLTPEI
VELAAARKPD LLITVDNGIA SVAGVEAANA RGIDVLVTDH HLPGDALPAA RAIVNPNQPG
CAFPSKHIAG VGVMFYVLLA LRAELRRRGA FASKEAEPRL DGLLDLVALG TVADVVRLDG
NNRVLVAQGL QRIRNGRMQP GIAALFRAAG REARTASGFD LGFGLGPRLN AAGRLSDMSL
GIECLITDDI GRAWDLAQQL DVMNRERREI EAGMQQQALA DLADIDPADA CTITLFNPEW
HQGVIGIVAG RLKEKFHRPS FTFAHADEAG TRVKGSGRSI PGFHLRDALD LVSKREPDLI
VAFGGHAMAA GLTLGTDDVP RFAAAFEAVA REWLSDDALA RVIETDGELE DAYFTPQFVG
LLDEAVWGQG FPAPLFSGEF DVVSQSLVKE KHLKLQLARG RQRFNAIWFN HTEPLPASAL
IAYRLVADTW NGVTRVQLIV EHAAG
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