| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2024 |
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| Symbol | |
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| ID | 6177095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2255036 |
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| End bp | 2256289 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681790 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001808721 |
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| Protein GI | 172061069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.329575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTTC CGTACGAATG GCAGATCGGC TGGCGCTACA CGCGCGCCGG CAAACGCACG
ACCGGCAACG GCTTCATTTC CTTCATCGCG CTCGTGTCGA TGCTCGGCAT CGCGCTCGGC
GTCGCGGCGC TGATCGTCGT GCTGTCCGTG ATGAACGGCT TCCAGAAGGA AGTGCGCGAC
CGCATGCTGT CGGTGCTCGC GCACGTCGAG GTGTTCTCGC CGACCGGCTC GATGCCCGAC
TGGCAACTGA CCGCGCAAGA GGCGCGCCGC AATCCGTCGG TGACGGGCGC GGCGCCTTAC
GTCGACGCGC AGGCGCTGCT CACGCGCCAG GACGCGGTGA GCGGCGTGAT GCTGCGCGGC
GTCGAGCCGT CGCTCGAACC GCAGGTGTCC GACATCGGCA AGGACATGAA GGCGGGCCAG
CTGACCGCGC TCGTGCCCGG CCAGTTCGGC ATCGTGCTCG GCGATGCGCT CGCGGGCAAC
CTCGGCGTGA CGGTCGGCGA CAAGATCACG CTGGTCGCGC CCGAAGGCAC GATCACGCCG
GCCGGGATGA TGCCGCGGCT CAAGCAGTTC ACGGTCGTCG GCGTGTTCGA ATCGGGCCAC
TACGAATACG ACAGCACGCT CGCGATGGTC AACATCCGCG ACGCGGAGGC GCTGTTCCGG
ATGTCCGCGC CGACCGGCGT GCGGCTGCGG CTCACCGACA TGCAGAAGGC GCCGCAGGTC
GCGGTCGAGC TGTCGCACAC GCTGTCGGGC AGCCTGTACA TCCGCGACTG GACCCAGCAG
AACAAGACCT GGTTCTCGGC CGTGCAGATC GAGAAGCGGA TGATGTTCAT CATCCTCACG
CTGATCATCG CGGTCGCGGC GTTCAACCTC GTGTCGTCGC TCGTGATGAC GGTGACCAAC
AAGCAGGCCG ACATCGCGAT CCTGCGTACG CTCGGCGCGC AGCCGGGGTC GATCATGAAG
ATCTTCGTCG TGCAGGGCGT GACGATCGGC TTCGTCGGCA CCGCGTCGGG CGTCGCGCTC
GGCTGCCTGA TCGCATGGAG CATTCCGTGG CTGATCCCGA TGATCGAGCA CCTGTTCGGC
GTGCAGTTCC TGCCGCCGTC GGTGTACTTC ATCAGCGAGC TGCCGTCCGA GCTCGTCGCG
GGCGACGTGA TCAAGATCGG TCTGATCGCG TTCGTGCTGT CGGCCGTCGC GACGCTCTAT
CCGAGCTGGC GCGGCGCGAA GGTGAAGCCG GCGGAGGCGC TGCGCTATGA ATGA
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| Protein sequence | MKLPYEWQIG WRYTRAGKRT TGNGFISFIA LVSMLGIALG VAALIVVLSV MNGFQKEVRD
RMLSVLAHVE VFSPTGSMPD WQLTAQEARR NPSVTGAAPY VDAQALLTRQ DAVSGVMLRG
VEPSLEPQVS DIGKDMKAGQ LTALVPGQFG IVLGDALAGN LGVTVGDKIT LVAPEGTITP
AGMMPRLKQF TVVGVFESGH YEYDSTLAMV NIRDAEALFR MSAPTGVRLR LTDMQKAPQV
AVELSHTLSG SLYIRDWTQQ NKTWFSAVQI EKRMMFIILT LIIAVAAFNL VSSLVMTVTN
KQADIAILRT LGAQPGSIMK IFVVQGVTIG FVGTASGVAL GCLIAWSIPW LIPMIEHLFG
VQFLPPSVYF ISELPSELVA GDVIKIGLIA FVLSAVATLY PSWRGAKVKP AEALRYE
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