Gene BamMC406_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2017 
Symboleno 
ID6178941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2245933 
End bp2247216 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID641681783 
Productphosphopyruvate hydratase 
Protein accessionYP_001808714 
Protein GI172061062 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00385308 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCAA TCGTAGATAT CATCGGCCGC GAGATTCTGG ATTCGCGCGG CAACCCCACC 
GTCGAATGCG ACGTGCTGCT CGAATCGGGC ACGATGGGCC GCGCGGCGGT GCCGTCGGGC
GCGTCCACCG GCTCGCGTGA AGCGATCGAA CTGCGTGACG GCGAAGCCGG CCGCTACAAC
GGCAAGGGCG TGCTGAAGGC GGTCGAGCAC ATCAACACCG AAATCTCCGA AGCCATCATG
GGCCTCGACG CGTCGGAACA GGCGTTCCTC GACAAGACCC TGCTCGAGCT GGACGGCACC
GACAACAAGT CGCGCCTCGG CGCGAACGCG ATGCTGGCCG TGTCGATGGC CGTCGCGAAG
GCAGCGGCCG AAGAAGCCGG CCTGCCGCTG TACCGCTACT TCGGCGGCTC GGGCGCGATG
CAGTTGCCGG TCCCGATGAT GAACATCGTC AACGGCGGCG CGCACGCGAA CAACAGCCTC
GACATCCAGG AATTCATGAT CGTCCCGGTC AGCCAGCCGA CGTTCCGTGA AGCCCTGCGT
TGCGGCGCGG AAGTGTTCCA CGCGCTGAAG AAGATCCTGA GCGACCGCGG CATGAGCACG
GCAGTCGGCG ACGAAGGCGG CTTCGCACCG AACTTCGGCA GCAACGACGA ATGCCTGTCG
ACGATCCTGC AGGCGATCGA GAAGGCCGGC TACCGTGCGG GCGAAGACGT CCTCCTCGCG
CTCGACTGCG CGGCCTCCGA GTTCTACCAC GACGGCAAGT ACCAGCTCGC CGGCGAAGGC
CTGCAACTGT CGTCGGCCGA ATTCACCGAC TACCTCGCGA CGCTCGCCGA CAAGTTCCCG
ATCGTGTCGA TCGAGGATGG CATGCACGAA AGCGACTGGG AAGGCTGGAA GCTGCTGACC
GAGCGCCTCG GCAAGAAGGT GCAGCTCGTC GGCGACGACC TGTTCGTCAC GAACACGCGC
ATCCTGAAGG AAGGCATCGA GAAGGGCATC GCGAACTCGA TCCTGATCAA GATCAACCAG
ATCGGTACGC TGACCGAAAC GTTCGCGGCA ATCGAAATGG CGAAGCGCGC GGGCTACACG
GCCGTGATCT CGCACCGCTC GGGCGAAACG GAAGATTCGA CGATCGCGGA TATCGCGGTC
GGCCTGAACG CCGGTCAGAT CAAGACGGGT TCGCTGTCGC GCAGCGACCG CATCTCGAAG
TACAACCAGC TGCTGCGTAT CGAGGAAGAT CTCGGCGATA TCGCGAGCTA CCCGGGCAAA
TCGGCTTTCT ATAACCTGCG CTAA
 
Protein sequence
MSAIVDIIGR EILDSRGNPT VECDVLLESG TMGRAAVPSG ASTGSREAIE LRDGEAGRYN 
GKGVLKAVEH INTEISEAIM GLDASEQAFL DKTLLELDGT DNKSRLGANA MLAVSMAVAK
AAAEEAGLPL YRYFGGSGAM QLPVPMMNIV NGGAHANNSL DIQEFMIVPV SQPTFREALR
CGAEVFHALK KILSDRGMST AVGDEGGFAP NFGSNDECLS TILQAIEKAG YRAGEDVLLA
LDCAASEFYH DGKYQLAGEG LQLSSAEFTD YLATLADKFP IVSIEDGMHE SDWEGWKLLT
ERLGKKVQLV GDDLFVTNTR ILKEGIEKGI ANSILIKINQ IGTLTETFAA IEMAKRAGYT
AVISHRSGET EDSTIADIAV GLNAGQIKTG SLSRSDRISK YNQLLRIEED LGDIASYPGK
SAFYNLR