Gene BamMC406_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2013 
Symbol 
ID6178855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2243352 
End bp2243876 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID641681779 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001808710 
Protein GI172061058 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.858963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00330641 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGATCT ACAAACTGGG CGAGACGGCC CCGACGATCC ACGAAAGCGT ATTCGTCGCC 
GATACGGCGG CCATCATCGG CAAGGTCGTG CTGGAGGAAA ACGCGAGCGT CTGGTTCGGC
GCGACGATTC GCGGCGACAA CGAGACGATC ACGGTCGGCA CCGGCAGCAA TGTCCAGGAA
GGCGCGGTCC TGCACACCGA CCCCGGTTTT CCGCTGACGA TCGCCGAAAA CGTGACGATC
GGGCACCAGG CAATGCTGCA CGGATGCACG ATCGGCGAAG GTTCGCTGAT CGGGATTCAG
GCGGTGGTCT TGAATGGTGC GGTCATCGGC CGCAACTGTC TGGTTGGTGC AGGCGCGGTC
GTGACGGAAG GCAAGGTGTT CCCGGACAAT TCGCTGATTC TCGGCGCCCC GGCGAAAGTC
GTGCGCGAGC TGTCGGCGGA CGACATCGCG CGACTGCGCG CCAATGCGAA GACGTACGTC
GAGCGACGTG CGCATTTCAA GGAGCAACTC GTGCGGATCG GGTGA
 
Protein sequence
MTIYKLGETA PTIHESVFVA DTAAIIGKVV LEENASVWFG ATIRGDNETI TVGTGSNVQE 
GAVLHTDPGF PLTIAENVTI GHQAMLHGCT IGEGSLIGIQ AVVLNGAVIG RNCLVGAGAV
VTEGKVFPDN SLILGAPAKV VRELSADDIA RLRANAKTYV ERRAHFKEQL VRIG