Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2013 |
Symbol | |
ID | 6178855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2243352 |
End bp | 2243876 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641681779 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001808710 |
Protein GI | 172061058 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.858963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00330641 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGATCT ACAAACTGGG CGAGACGGCC CCGACGATCC ACGAAAGCGT ATTCGTCGCC GATACGGCGG CCATCATCGG CAAGGTCGTG CTGGAGGAAA ACGCGAGCGT CTGGTTCGGC GCGACGATTC GCGGCGACAA CGAGACGATC ACGGTCGGCA CCGGCAGCAA TGTCCAGGAA GGCGCGGTCC TGCACACCGA CCCCGGTTTT CCGCTGACGA TCGCCGAAAA CGTGACGATC GGGCACCAGG CAATGCTGCA CGGATGCACG ATCGGCGAAG GTTCGCTGAT CGGGATTCAG GCGGTGGTCT TGAATGGTGC GGTCATCGGC CGCAACTGTC TGGTTGGTGC AGGCGCGGTC GTGACGGAAG GCAAGGTGTT CCCGGACAAT TCGCTGATTC TCGGCGCCCC GGCGAAAGTC GTGCGCGAGC TGTCGGCGGA CGACATCGCG CGACTGCGCG CCAATGCGAA GACGTACGTC GAGCGACGTG CGCATTTCAA GGAGCAACTC GTGCGGATCG GGTGA
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Protein sequence | MTIYKLGETA PTIHESVFVA DTAAIIGKVV LEENASVWFG ATIRGDNETI TVGTGSNVQE GAVLHTDPGF PLTIAENVTI GHQAMLHGCT IGEGSLIGIQ AVVLNGAVIG RNCLVGAGAV VTEGKVFPDN SLILGAPAKV VRELSADDIA RLRANAKTYV ERRAHFKEQL VRIG
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