Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2003 |
Symbol | |
ID | 6178882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2234103 |
End bp | 2234879 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681769 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001808700 |
Protein GI | 172061048 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.645635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000218152 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGCTTCG CCAGCCTCGG TAGCGGCAGC GAAGGCAACG CACTGGTCGT CGAGGTCGCA AGCGGCACGA CGACCACCCG CGTGCTGCTC GACTGCGGTT TTTCAGCGAA GGAGGTCGAG CGCCGCCTCG GCCGCCTGAA TCTCGGCATC GACGATCTCG ATGCAATCCT CGTTACCCAT GAACACAGCG ACCACGTCGG CAGCGCGCTG ACGCTCGCGC GGCGCGGGTC GCTGCCGCTC TACATGAGCT GGGGCACCGC GCGCGCGGTG GGCGCGGACG AGGCCGATGT CGATCTCCAC GTGTTGTGGG GCGACGAGAC GGCCGCGATA CGCGATCTGG CCGTGATGCC CTATACGGTG CCCCACGACG CGCGGGAACC GCTCCAGTTC GTCTTTATGG ACGGTTGCCG CCGGCTCGGC GTGCTGACCG ACGTCGGAAT GGCCACGCCG CACATCACGA CCGTTCTGAG CGGCTGTGAC GCGCTGGTGC TCGAATCCAA CCACGATACC GCGATGCTGG CCGGCAGCCG CTATCCGCAG TCGCTGAAGG CGCGGATCGG CGGCAAGCAC GGCCACCTGA GCAACGATGC CGCTGCCGGC ATCCTCGCGT CGCTCGAACG CAGCCGTCTC CAGCATCTGG TCGCGGCGCA CCTGAGCCAG CAGAACAATC GGCCCGAGCT GGCCCGCCAG GCGTTTGCCG GCGTGCTGGG AACGGACGGG GAAGAGGTAG TCGTCGCCAC GCAGGACGCG GGCTTCGACT GGCTGACGCT CGGCTGA
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Protein sequence | MRFASLGSGS EGNALVVEVA SGTTTTRVLL DCGFSAKEVE RRLGRLNLGI DDLDAILVTH EHSDHVGSAL TLARRGSLPL YMSWGTARAV GADEADVDLH VLWGDETAAI RDLAVMPYTV PHDAREPLQF VFMDGCRRLG VLTDVGMATP HITTVLSGCD ALVLESNHDT AMLAGSRYPQ SLKARIGGKH GHLSNDAAAG ILASLERSRL QHLVAAHLSQ QNNRPELARQ AFAGVLGTDG EEVVVATQDA GFDWLTLG
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