| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1997 |
|---|
| Symbol | |
|---|
| ID | 6178789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2226059 |
|---|
| End bp | 2227174 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641681763 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001808694 |
|---|
| Protein GI | 172061042 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.337155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0103218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTAG CTGATTTCAT TGTTAGGAAC ATAGAGCCGA TCCTGGTGCA GTGGGAAGCG
TTTGCCGCCA CGCTGCTACC AGCCGCCAGG AGCATGGACT CGCTCGCGCT GCGCGACCAA
GCACGCCAGA TCCTGGAGGC CGTAGCCAAG GACATAACGA CCCCGCAAAC AAGGGAAGAT
CAACATGAAA AATCGTTGGG GCGCGCGCCC CAGCCGGTGA AGGCCACGGC CGCGCAGACG
CATGCCGTTC TGCGCGCCCG GCGGGGTTTC AACATCAACC AGCTGGCGGC CGAGTATCGG
GCGCTGCGTG CCAGTGTGCT GCGCTTATGG ATCGACGAGT GCAAGCCGAG CGCGCCTGAT
CTGGACGACA TGATTCGCTT CAATGAAGCG ATAGATCAGG CGCTGGCGGA ATCGCTCGCT
TTCTTCGCCG AACAGGTCGA GCAGTCTCGC AACTTGTTGC TCGGTATGCT GGGTCACGAC
ATGCGGACGC CGTTGCAGAC CATTCACGTC ACAGCGTCCT ATCTTGCCGC GCTCAATGCG
GGGGAGGCGG TATCAGACGC TGCCGCCCGG CTGATCAGAA GCGGCAGCCG CATGCAGGGC
CTCCTTGACG ATCTCTGCGA TTACAACCGG ACCCAGCTCG GGGTAGGCAT CAACGTCGTT
CCACGCAATA TCGATCTCGC CCGTGTGCTC GCCAATGTGG TCGATGAATT GCAGGTGGCT
CATCCCGATC GCGAAATCAA TCTCGAGGTA AGCGGCGATC TCCGAGGGGA CTGGGACGAT
CAGCGAATGC AGCGGTTGCT GAGCAATCTC GTGGCCAACG CCGTCAAGTA CGGAACGCCC
GAGACACCGG TATGGGTGAT GGCAGCATCG GCTGATGCGG AAGTGCTCAT CGAGATCAGG
AACAGTGGGC CGGCCATGGA TCGGTGCACG CTGGATCGCA TCTTCGACCC GCTTCAGCGC
GGAGCGCATC AACCAGACTT GCCCAGTGAC GATGTTGGCT TGGGGCTTGG CTTGTTCATC
GCCAGCGAAA TCGCAAAGGC ACACCACGGC CGTATTGACG CGCGGTCCGA TCAGACCGAA
ACAATATTCG CGGTACGCCT GCCGAAAGGC GCATGA
|
|---|
| Protein sequence | MRLADFIVRN IEPILVQWEA FAATLLPAAR SMDSLALRDQ ARQILEAVAK DITTPQTRED
QHEKSLGRAP QPVKATAAQT HAVLRARRGF NINQLAAEYR ALRASVLRLW IDECKPSAPD
LDDMIRFNEA IDQALAESLA FFAEQVEQSR NLLLGMLGHD MRTPLQTIHV TASYLAALNA
GEAVSDAAAR LIRSGSRMQG LLDDLCDYNR TQLGVGINVV PRNIDLARVL ANVVDELQVA
HPDREINLEV SGDLRGDWDD QRMQRLLSNL VANAVKYGTP ETPVWVMAAS ADAEVLIEIR
NSGPAMDRCT LDRIFDPLQR GAHQPDLPSD DVGLGLGLFI ASEIAKAHHG RIDARSDQTE
TIFAVRLPKG A
|
|---|
| |