Gene BamMC406_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1987 
Symbol 
ID6178766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2216400 
End bp2217200 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID641681753 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001808684 
Protein GI172061032 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.301341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.440404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGG AGAGTCCGCC GCGAAGCGTC TCCGCGGGCG TGCCGGGCGA GCGCGAATAC 
GCGCAAGCCG CACGCCCGTT CCTGTTTCTG TCCGATCTGC ACCTGAGCGA GGCGATTCCG
AAGACGGTCG CCGCGTTCGA GCATTTCGTG AAATACACGG CCGACAGCGC CGACTCGGTG
TTCATCCTCG GCGACCTGTT CGAATACTGG ATCGGCGACG ACGTGCTCGA CGACGATCCG
TTCGCGGCAC GCATGGCCGC GCTGATGCAT ACGTTCTCGG AGCGCGGCAT CGCGCTCTAC
GTGATGCACG GCAATCGCGA TTTCCTGCTC GGCCGGCGCT TCATGAAGGC GGCCGGCGCG
ATGCTGCTGC CCGACCCCGC GCTGATCATG GCGTTTGGCC AGCGCATCGT GCTCGCGCAC
GGCGACGCGC AATGCACGGC CGATCGCGGC TATCAGGTGT TCCGGCGGTT CGCGCGCAAT
CGCGTCGCGC AGGCGCTGTT TCTCGTATGG CCGTTCCGCT GGCGCCGTGC GCTCGCCGAG
CGGATGCGCT CGAACAGCGA AGCGGGCCGG ATGCGCCCCG TTTCGGCGAT CTACGATGTC
ACGCGTGAAG GCGTGGCGGC GCTGTTCAAG AAGAGTCGCG CGAGTGTGAT CATTCACGGC
CACACGCATC GCCCCGCGCG CCACCTCGAA CCGGGCGGGA TTCGCTGGGT ACTGCCCGAT
TGGGATCTCG ACCACGGCCC GCGGCGCGGC GGCTATCTGC GCGTCGACGC CGAGGGCATC
CACGCGATGC CGCTCGACTG A
 
Protein sequence
MLQESPPRSV SAGVPGEREY AQAARPFLFL SDLHLSEAIP KTVAAFEHFV KYTADSADSV 
FILGDLFEYW IGDDVLDDDP FAARMAALMH TFSERGIALY VMHGNRDFLL GRRFMKAAGA
MLLPDPALIM AFGQRIVLAH GDAQCTADRG YQVFRRFARN RVAQALFLVW PFRWRRALAE
RMRSNSEAGR MRPVSAIYDV TREGVAALFK KSRASVIIHG HTHRPARHLE PGGIRWVLPD
WDLDHGPRRG GYLRVDAEGI HAMPLD