| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1921 |
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| Symbol | rpsB |
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| ID | 6177151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2136423 |
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| End bp | 2137163 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641681680 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001808619 |
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| Protein GI | 172060967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.407888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTTA CGATGCGCCA AATGCTGGAA GCGGGTGTCC ACTTCGGTCA CCAGACGCGC
TTCTGGAACC CGAAGATGGC CCCGTTCATT TTCGGTCACC GCAACAAGAT TCACATCATC
AACCTCGAAA AGACGCTGCC GATGTTCACG GACGCACAGA AGTACGTGCG TCAGCTGGCA
GCGAACCGCG GCACGATCCT GTTCGTCGGC ACGAAGCGCC AGTCGCGTGA CACGATCGCC
CAGGAAGCGC AGCGCGCGGG CATGCCGTTC GTCAACGCAC GCTGGCTCGG CGGCATGATG
ACCAACTTCA AGACGCTGAA GGTATCGATC AAGCGCCTGA AGGACATGGA AGCGGCAGTC
GAGGCAGGCG AGCTCGAGAA GATGAGCAAG AAGGAAGCGC TGCTGTTCGA ACGCGAAATC
GCCAAGCTGC AGAAGTCGAT CGGCGGCGTG AAGGACATGG GCGGCATTCC GGACGCAATC
TTCGTCGTCG ACGTCGGCTA CCACAAGATC GCCGTCACGG AAGCGAACAA GCTGGGCGTG
CCGGTCATCG CCGTGGTCGA CACGAACCAC TCGCCGGAAG GTGTGGATTA CGTGATCCCG
GGTAACGACG ACTCGAGCAA GGCAGTCGCG CTGTACGCTG AAGGCGTGGC CGACGCGATC
CTCGAAGGCC GTGCGAACGC GGTCAACGAA GTGGTCCAGG CGGCGCGCGG CGACGACGAG
TACGTCGAGG AAAACGCGTA A
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| Protein sequence | MAVTMRQMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKTLPMFT DAQKYVRQLA
ANRGTILFVG TKRQSRDTIA QEAQRAGMPF VNARWLGGMM TNFKTLKVSI KRLKDMEAAV
EAGELEKMSK KEALLFEREI AKLQKSIGGV KDMGGIPDAI FVVDVGYHKI AVTEANKLGV
PVIAVVDTNH SPEGVDYVIP GNDDSSKAVA LYAEGVADAI LEGRANAVNE VVQAARGDDE
YVEENA
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