| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1914 |
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| Symbol | |
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| ID | 6177013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2129588 |
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| End bp | 2130976 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681673 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001808612 |
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| Protein GI | 172060960 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.344578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGC TGGTCGAACT GATCGCGTTT GCGGTGGCGA TCGGGGTGCT GGTCGTCGTG
CATGAGTACG GACATTATCG CGTCGCGCGC TGGTGCGGCG TGAAGGTGCT GCGTTTCTCG
ATCGGTTTCG GCCAGCCCGT CGCGCGCTGG GTCAGCCGCA GGACGGGCAC CGAATGGACG
CTGTCCGCAC TGCCGCTCGG CGGTTACGTG AAGATGCTCG ACGAGCGCGA GCCGGGGGCG
GACATCAAGC CCGAGGAGCT CGCACAGGCA TTCAACCGGC AATCGGTGTT CAAGCGCATC
GCGATCGTCG CCGCCGGCCC GATCGCGAAC TTCCTGTTGG CAATCGTCCT GTTTTCCGTT
GTATTCGCCA CCGGCGTGAC CGAGCCGGCC GCGGTGCTCG CGCCGCCGGC CGCCGGCACG
GTGGCTGCCC GCGCGGGCTT CGACGGCAAC GAGACGATCG TCTCGATCCG TGACGTGCAC
GCAGGCGACG CGCAGGGTAG CGAGGCCGTG CCGGTGCGTT CGTGGTCGGA TCTGCGCTGG
AAGCTGCTGG CCGCCGCGTT CGATCATCGC GAGGTCGTGC TCGGCGCGCG CGACGGCGGC
GCGTCGACGT TCGACTTCCG CGTCGACCTG CGCAACGTTC CCGAAAGCGC GCTCGACGAC
GATTTCATGA CGCACCTGGG CTTCGAGACC GGCGGCGGCA CGCTGTCGGT GGCGTCGGTG
CAGCCCGGCA GCGCGGCCGA GCGCGCGGGC CTGAAAGCCG GCGACAAGCT GCTCGCGCTC
GACGGCAAGC CCATCGGCGG CGCCTCGCGC TTCATCGACG CGGTGAAGCA CCACGCGGGG
CAGCCGGTCG ACCTGCGCGT CGAGCGCGGC GGCGCCATGC AGACGGTGTC GATCGTGCCG
CAGGCGCAGC GCGACGACGA GACGGGCCAG CAGGTCGGCC GCATCGGCGC GGCGCTGTCG
ATGCACACGC CGTCGGTCGA CGTGCGCTAC GGTCCGATCG AGAGCCTGCG GCTCGGCGCG
CACCGCACGT GGGACATCGC CGTCTATTCG CTGAAGATGT TCGGGCGCAT GATCACGGGC
AACGCGTCGC TGAAGAACCT GTCCGGTCCG GTGACGATTG CGGACTACGC GGGCAAGAGC
GCGCGGCTCG GTCCGTCGGC CTTCCTGTCG TTCCTCGCCC TTGTCAGCAT TAGCCTCGGG
GTGTTGAACT TGCTGCCGAT TCCCGTTTTG GACGGGGGGC ATCTGTTATA TTATCTGGTT
GAAGCCGCGA CCGGGAAAGC CGTTTCGGAG CGCTGGCAGC TGATTCTGCA AAGAGCCGGG
TTGATCTGCA TCGTCGCATT GTCGGCGATC GCGCTGTTCA ACGACCTGGC TCGGTTAATC
CATTTCTGA
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| Protein sequence | MNVLVELIAF AVAIGVLVVV HEYGHYRVAR WCGVKVLRFS IGFGQPVARW VSRRTGTEWT
LSALPLGGYV KMLDEREPGA DIKPEELAQA FNRQSVFKRI AIVAAGPIAN FLLAIVLFSV
VFATGVTEPA AVLAPPAAGT VAARAGFDGN ETIVSIRDVH AGDAQGSEAV PVRSWSDLRW
KLLAAAFDHR EVVLGARDGG ASTFDFRVDL RNVPESALDD DFMTHLGFET GGGTLSVASV
QPGSAAERAG LKAGDKLLAL DGKPIGGASR FIDAVKHHAG QPVDLRVERG GAMQTVSIVP
QAQRDDETGQ QVGRIGAALS MHTPSVDVRY GPIESLRLGA HRTWDIAVYS LKMFGRMITG
NASLKNLSGP VTIADYAGKS ARLGPSAFLS FLALVSISLG VLNLLPIPVL DGGHLLYYLV
EAATGKAVSE RWQLILQRAG LICIVALSAI ALFNDLARLI HF
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