Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1913 |
Symbol | |
ID | 6178932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2127217 |
End bp | 2129523 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641681672 |
Product | outer membrane protein assembly complex, YaeT protein |
Protein accession | YP_001808611 |
Protein GI | 172060959 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.426313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCAAAC CTCATCGCTT TGTACCTAAG ACAGTTGCAG CGGCCGCGCT CGCCGCGCAC GGCCTCGCGG CGCATGCAGC GGCACCGTTC GTGGTGCAAG ACATCAAGAT CGAGGGGTTG CAGCGCGTCG AAGCGGGTTC GGTGTTTGCC TACCTGCCGA TCAAGCAGGG CGATACCTTC ACCGACGACA AGGCATCCGA AGCAATTCGC GCGCTGTACG CGACGGGCTT CTTCAACGAC GTGCGCATCG CCACCCAGGG CAACGTCGTG ATCGTGCAGG TGCAGGAGCG TCCGGCCATC GCGTCGATCG ACTTCACCGG CACGAAGGAA TTCGACAAGG ACAATCTGAC GAAGGCGCTG CGCGCGGTGG GTCTGGCCGA CGGCCGCTAC TACGACAAGG CGCTCGTCGA CAAGGCGGAG CAGGAGCTCA AGCGTCAGTA CCTGACGCGT GGCTTCTACG CGGCCGAAGT CAAGACGACG ATCACGCCGG TCGACGCGAA CCGCGTGTCG ATCCTGTTCG CGGTCGCCGA AGGTCCGAGC GCGAAGATCC GCCAGATCAA CTTCATCGGC AACAAGGCGT TCAGCACCAG CAAGCTGCGC GACGAGATGC AGTTGTCCAC GCCGAACTGG TTCTCCTGGT ACACGAAGAA CGACCTGTAC TCGAAGGAAA AGCTGACGGG CGACCTCGAG GCCGTGCGCT CGTACTACCT GAACCGCGGC TACCTCGAGT TCAACATCGA GTCGACCCAG GTGTCGATCT CGCCCGACAA GAAGGACATG TACCTGACGG TCACGCTGCA CGAAGGCGAG CCGTACACGG TGTCGGGCAT CAAGCTGTCG GGCAACCTGC TCGATCGCGA AGCCGAACTG ACCAAGCTGA TCAAGATCAA GCCGGGCGAT CGCTTCTCGG CCGAAAAGCT GCAGCAAACG ACGAAGTCGA TCGTCGACAA GCTCGGCGAA TACGGTTACG CATTCGCGAC CGTCAACGCG CAGCCGGACA TCGACCAGGC GAACCACAAG GTGAACCTGA ACCTCGTCGT CGATCCGAGC CGTCGCGTGT ATGTGCGCCG CATCAACGTG GTCGGCAACA CGCGTACGCG CGACGAAGTC GTGCGCCGCG AAATGCGCCA GCTCGAAAGC TCGTGGTTCG ATTCGAACCG CCTTGCGCTG TCGAAGGATC GCGTGAACCG TCTCGGCTAC TTCACCAACG TCGACGTGAC GACGGTGCCG GTCGAAGGCA CGAACGACCA GGTCGACGTG ACCGTGAAGG TCGATGAAAA GCCGACCGGC GCGATCACGC TGGGCGCGGG CTTCTCGTCG ACGGACAAGG TGGTGCTGTC GGCCGGCGTG TCGCAGGACA ACGTGTTCGG CTCGGGCACG AGCCTGTCGG TAAACGTCAA CACCGCGAAG AGCTACCGCA CGCTGACCGT CACGCAGGTC GACCCGTACT TCACGGTCGA CGGCATCAAG CGGATCACGG ACGTCTACTA CCGCACGTAC CAGCCGCTCT ACTATTCGAC GAGCTCGAGC TTCCGGATCA TCAGCGCGGG CGGCAACCTG AAGTTCGGCA TTCCGTTCTC GGAAGTCGAC ACCGTCTACT TCGGCGCGGG CTTCGAGCAG AACCGTCTCG ATACTGACGA CAACACACCG GCGAGCTACA AGGCGTATGT CAACGAGTTC GGCCGCGTGT CGAACACGGT GCCGCTGACC GTCGCGTGGT CGCGCGACGC GCGTGACAGC GCGCTGATCC CGAGCCGCGG CTACTTCACG CAGGCGAACG TCGAGTACGG TGTGCCGGTC GGCAAGATCC AGTACTACAA GGCCGACCTG CAGGCGCAGT ACTACTATTC GTTCTCGCGC GGCTTCATCC TGGGCATGAA CCTGCAAGGC GGCTACGGCA ACGGTATCGG CAACCCGTAC CCGATCTTCA AGAACTACTA CGCGGGCGGT ATCGGCTCCG TGCGTGGCTA CGAGCCGAGC TCGCTGGGCC CGCGCGACAC GAAGACGAAC GACCCGATCG GCGGTTCGAA GATGCTCGTC GGCAACATCG AGCTGACGTT CCCGCTGCCG GGCACCGGCT ACGACCGCAC GCTGCGCGTG TTCACGTTCC TCGACGGCGG CAACGTGTGG GGCAACGCGC CGGGCGGCAC GAGTACCGGC GCGAACGGCC TGCGTTACGG CTACGGTGTG GGTCTCGCGT GGATCTCGCC GATCGGCCCG CTGAAGCTGA GCCTCGGCTT CCCGCTGCAG AAGCATGAAG GCGACCAGTA CCAGAAATTC CAGTTCCAGA TCGGGACGGC GTTCTGA
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Protein sequence | MFKPHRFVPK TVAAAALAAH GLAAHAAAPF VVQDIKIEGL QRVEAGSVFA YLPIKQGDTF TDDKASEAIR ALYATGFFND VRIATQGNVV IVQVQERPAI ASIDFTGTKE FDKDNLTKAL RAVGLADGRY YDKALVDKAE QELKRQYLTR GFYAAEVKTT ITPVDANRVS ILFAVAEGPS AKIRQINFIG NKAFSTSKLR DEMQLSTPNW FSWYTKNDLY SKEKLTGDLE AVRSYYLNRG YLEFNIESTQ VSISPDKKDM YLTVTLHEGE PYTVSGIKLS GNLLDREAEL TKLIKIKPGD RFSAEKLQQT TKSIVDKLGE YGYAFATVNA QPDIDQANHK VNLNLVVDPS RRVYVRRINV VGNTRTRDEV VRREMRQLES SWFDSNRLAL SKDRVNRLGY FTNVDVTTVP VEGTNDQVDV TVKVDEKPTG AITLGAGFSS TDKVVLSAGV SQDNVFGSGT SLSVNVNTAK SYRTLTVTQV DPYFTVDGIK RITDVYYRTY QPLYYSTSSS FRIISAGGNL KFGIPFSEVD TVYFGAGFEQ NRLDTDDNTP ASYKAYVNEF GRVSNTVPLT VAWSRDARDS ALIPSRGYFT QANVEYGVPV GKIQYYKADL QAQYYYSFSR GFILGMNLQG GYGNGIGNPY PIFKNYYAGG IGSVRGYEPS SLGPRDTKTN DPIGGSKMLV GNIELTFPLP GTGYDRTLRV FTFLDGGNVW GNAPGGTSTG ANGLRYGYGV GLAWISPIGP LKLSLGFPLQ KHEGDQYQKF QFQIGTAF
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