Gene BamMC406_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1912 
Symbol 
ID6178776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2126655 
End bp2127182 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID641681671 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_001808610 
Protein GI172060958 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.753095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.41157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAACCG GTAAGTTTTC GAAACGAGTG ATGTGTGCGC TGACCGTTGC GCTGGCCTTG 
GGCGCGGCGA CGGCGCATGC TCAGGACGTC GCCCGCATCG CGGCGGTCAA TTCGGATCGG
ATCCTGCGCG AGTCGGCGCC CGCCAAGGTG GCGCAGACGA AACTCGAAGC CGAGTTCGCG
AAGCGCGACA AGGAACTGCA GGACCTCGCG GCGCGCCTGA AGTCGATGTC CGACTCGCTG
GACAAGAACG GTGCGTCGCT GTCGGCGGCC GATCGTGCGC AGAAGCAGCG CGATCTCGCG
CAGCTCGACA CCGACTTCCA GCGCAAGCAG CGCGAGTTTC GCGAGGACCT GAACCAGCGC
CGCAATGAGG AACTCGCGGC GGTGCTGGAG CGCGCGAACA AGGTCATCAA GCAGATAGCC
GAGCAGCAGA ATTACGACCT GATCGTGCAG GAAGCCGTGT ACGTCAGTCC GCGCATCGAC
ATCACCGACA AGGTGCTCAA GGCGCTCGCG TCCGGCTCGA CGAACTGA
 
Protein sequence
MLTGKFSKRV MCALTVALAL GAATAHAQDV ARIAAVNSDR ILRESAPAKV AQTKLEAEFA 
KRDKELQDLA ARLKSMSDSL DKNGASLSAA DRAQKQRDLA QLDTDFQRKQ REFREDLNQR
RNEELAAVLE RANKVIKQIA EQQNYDLIVQ EAVYVSPRID ITDKVLKALA SGSTN